C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 86
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000139584 Fam86-003 ENSMUSG00000022544 10090 - 16:5247375-5255956 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalColonLiverOvaryTestisENSMUST00000139584
Transcript ID Adipose Adrenal Colon Liver Ovary Testis
ENSMUST00000139584 10.962±0.84 23.479±0.00 11.989±0.90 11.497±0.00 22.398±4.20 13.002±1.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002BU CIL_0002BU_0002 CGP 16:5211828-5244912
CIL_00046A CIL_00046A_0002 CGP 16:5233621-5255983
CIL_0000EQ CIL_0000EQ_0002 CGP 16:5244152-7412479

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000313946 FAM86EP-002 processed_transcript Homo_sapiens 6e-24 117
ENST00000427587 FAM86A-001 protein_coding Homo_sapiens 0 675
ENST00000448322 FAM86GP-001 unprocessed_pseudogene Homo_sapiens 0 514
ENST00000458008 FAM86A-002 protein_coding Homo_sapiens 0 217
ENST00000477247 FAM86DP-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 627
ENST00000504375 FAM86EP-009 processed_transcript Homo_sapiens 0 198
ENST00000510506 FAM86EP-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 614
ENST00000510565 FAM86EP-006 processed_transcript Homo_sapiens 2e-24 117
ENST00000511488 FAM86EP-004 processed_transcript Homo_sapiens 0.000000000000002 88
ENST00000513466 FAM86HP-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 289
ENST00000585436 FAM86A-008 nonsense_mediated_decay Homo_sapiens 0 259
ENST00000585975 FAM86A-010 retained_intron Homo_sapiens 0 436
ENST00000586444 FAM86A-009 retained_intron Homo_sapiens 2e-20 104
ENST00000587133 FAM86A-011 protein_coding Homo_sapiens 7e-29 132
ENST00000587161 FAM86A-003 nonsense_mediated_decay Homo_sapiens 2e-20 104
ENST00000587200 FAM86A-013 nonsense_mediated_decay Homo_sapiens 4e-30 135

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