C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00046E_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000002127-ENSDARG00000075715 CGP 7955 2:31153269-31173582
GeneTranscriptPositionBiotype
ENSDARG00000002127 (stam)
signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 		ENSDART00000026966 (stam-201) 31153269-31168327 protein_coding
ENSDART00000141170 (stam-001) 31153269-31168328 protein_coding
ENSDART00000142727 (stam-002) 31164178-31165136 retained_intron
ENSDARG00000075715 (TMEM236 (1 of 2))
transmembrane protein 236 		ENSDART00000109866 (TMEM236 (1 of 2)-201) 31170315-31173582 protein_coding
ENSDART00000136360 (TMEM236 (1 of 2)-001) 31170284-31173582 protein_coding
CIL_00046E_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000136738-ENSG00000148483 CGP 9606 10:17644125-17800868
GeneTranscriptPositionBiotype
ENSG00000148483 (TMEM236)
transmembrane protein 236 		ENST00000377495 (TMEM236-001) 17752252-17800868 protein_coding
CIL_00046E_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026718-ENSMUSG00000061531 CGP 10090 2:14074100-14221971
GeneTranscriptPositionBiotype
ENSMUSG00000026718 (Stam)
signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 		ENSMUST00000028050 (Stam-002) 14074190-14142705 protein_coding
ENSMUST00000102960 (Stam-001) 14074100-14148338 protein_coding
ENSMUST00000128777 (Stam-004) 14130845-14133707 processed_transcript
ENSMUST00000131734 (Stam-007) 14134122-14141718 processed_transcript
ENSMUST00000138989 (Stam-005) 14074427-14129073 protein_coding
ENSMUST00000140694 (Stam-006) 14128337-14129168 processed_transcript
ENSMUST00000144944 (Stam-003) 14129051-14131390 processed_transcript
ENSMUST00000156901 (Stam-008) 14074108-14128613 processed_transcript
ENSMUSG00000061531 (Tmem236)
transmembrane protein 236 		ENSMUST00000077517 (Tmem236-001) 14174524-14221971 protein_coding
ENSMUSG00000083545 (Gm13320)
predicted gene 13320 		ENSMUST00000120155 (Gm13320-001) 14189609-14189938 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00046E_0001ENSDARG00000002127ENSDART00000026966ENSDART00000141170ENSDART00000142727ENSDARG00000075715ENSDART00000109866ENSDART00000136360CIL_00046E_0002ENSG00000148483ENST00000377495CIL_00046E_0003ENSMUSG00000026718ENSMUST00000028050ENSMUST00000102960ENSMUST00000128777ENSMUST00000131734ENSMUST00000138989ENSMUST00000140694ENSMUST00000144944ENSMUST00000156901ENSMUSG00000061531ENSMUST00000077517ENSMUSG00000083545ENSMUST00000120155
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00046E_0001ENSDARG00000002127ENSDART00000026966ENSDART00000141170ENSDARG00000075715ENSDART00000109866ENSDART00000136360CIL_00046E_0002ENSG00000148483ENST00000377495CIL_00046E_0003ENSMUSG00000026718ENSMUST00000028050ENSMUST00000102960ENSMUST00000131734ENSMUST00000138989ENSMUST00000156901ENSMUSG00000061531ENSMUST00000077517ENSMUSG00000083545ENSMUST00000120155
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000002127 ENSDART00000026966 N/A N/A N/A 19.923±0.00 N/A N/A 11.520±8.37 11.737±3.36 N/A N/A N/A N/A N/A N/A
ENSDART00000141170 N/A N/A N/A 17.594±5.31 N/A N/A 12.442±5.58 7.988±0.39 2.042±0.00 N/A 5.461±0.00 N/A N/A N/A
ENSDART00000142727 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000075715 ENSDART00000109866 N/A N/A N/A 0.101±0.05 N/A N/A 0.208±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000136360 N/A N/A N/A N/A N/A N/A N/A 1.402±0.00 N/A N/A 0.422±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000148483 ENST00000377495 0.259±0.00 0.258±0.00 N/A 0.041±0.03 0.310±0.17 2.051±1.39 0.149±0.02 0.200±0.08 0.170±0.15 0.164±0.07 0.111±0.01 0.048±0.01 0.442±0.10 0.126±0.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026718 ENSMUST00000028050 N/A N/A N/A 3.550±0.00 N/A N/A 0.668±0.00 N/A N/A N/A N/A N/A 2.506±0.39 1.835±0.00
ENSMUST00000102960 9.193±1.39 10.538±2.37 9.039±0.57 16.155±8.89 7.434±2.49 10.241±1.32 3.443±0.16 7.086±1.42 6.934±2.13 10.647±1.02 1.754±0.41 10.504±5.26 4.970±2.59 3.490±1.40
ENSMUST00000128777 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131734 N/A N/A N/A 28.818±0.00 N/A N/A N/A N/A N/A N/A N/A 22.372±0.00 17.197±0.67 N/A
ENSMUST00000138989 N/A N/A N/A 14.493±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140694 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144944 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156901 N/A 21.078±2.60 N/A N/A N/A N/A N/A N/A 6.620±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000061531 ENSMUST00000077517 0.025±0.01 0.067±0.04 0.033±0.01 0.034±0.01 0.029±0.01 17.411±1.97 0.008±0.00 0.029±0.01 0.046±0.02 0.099±0.06 0.036±0.02 0.035±0.03 0.042±0.03 0.269±0.13
ENSMUSG00000083545 ENSMUST00000120155 N/A 0.373±0.00 N/A 2.102±0.00 1.577±0.00 1.774±1.64 N/A 0.298±0.09 0.843±0.46 0.218±0.00 N/A 0.727±0.04 0.273±0.11 0.405±0.18

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