C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: signal transducing adaptor molecule (SH3 domain and ITAM motif) 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102960 Stam-001 ENSMUSG00000026718 10090 + 2:14074100-14148338 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102960
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102960 9.193±1.39 10.538±2.37 9.039±0.57 16.155±8.89 7.434±2.49 10.241±1.32 3.443±0.16 7.086±1.42 6.934±2.13 10.647±1.02 1.754±0.41 10.504±5.26 4.970±2.59 3.490±1.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006BI CIL_0006BI_0002 CGP 2:13975563-14148338
CIL_00046E CIL_00046E_0003 CGP 2:14074100-14221971

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005768 IEA endosome
GO:0006886 IEA intracellular protein transport
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000377500 STAM-003 protein_coding Homo_sapiens 0 721
ENST00000377524 STAM-001 protein_coding Homo_sapiens 0 2542
ENST00000445846 STAM-002 nonsense_mediated_decay Homo_sapiens 0 575
ENST00000486183 STAM-004 retained_intron Homo_sapiens 0 364
ENST00000494250 STAM-005 retained_intron Homo_sapiens 0 375

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