C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: signal transducing adaptor molecule (SH3 domain and ITAM motif) 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026718 Stam 10090 + 2:14074100-14148338 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028050 Stam-002 14074190-14142705 protein_coding
  ENSMUST00000102960 Stam-001 14074100-14148338 protein_coding
  ENSMUST00000128777 Stam-004 14130845-14133707 processed_transcript
  ENSMUST00000131734 Stam-007 14134122-14141718 processed_transcript
  ENSMUST00000138989 Stam-005 14074427-14129073 protein_coding
  ENSMUST00000140694 Stam-006 14128337-14129168 processed_transcript
  ENSMUST00000144944 Stam-003 14129051-14131390 processed_transcript
  ENSMUST00000156901 Stam-008 14074108-14128613 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028050ENSMUST00000102960ENSMUST00000131734ENSMUST00000138989ENSMUST00000156901
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028050 N/A N/A N/A 3.550±0.00 N/A N/A 0.668±0.00 N/A N/A N/A N/A N/A 2.506±0.39 1.835±0.00
ENSMUST00000102960 9.193±1.39 10.538±2.37 9.039±0.57 16.155±8.89 7.434±2.49 10.241±1.32 3.443±0.16 7.086±1.42 6.934±2.13 10.647±1.02 1.754±0.41 10.504±5.26 4.970±2.59 3.490±1.40
ENSMUST00000131734 N/A N/A N/A 28.818±0.00 N/A N/A N/A N/A N/A N/A N/A 22.372±0.00 17.197±0.67 N/A
ENSMUST00000138989 N/A N/A N/A 14.493±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156901 N/A 21.078±2.60 N/A N/A N/A N/A N/A N/A 6.620±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006BI CIL_0006BI_0002 CGP 2:13975563-14148338
CIL_00046E CIL_00046E_0003 CGP 2:14074100-14221971

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005768 IEA endosome
GO:0006886 IEA intracellular protein transport
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002127 stam signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 protein_coding Danio_rerio
ENSG00000136738 STAM signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 protein_coding Homo_sapiens

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