C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004A0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000119661-ENSG00000176903 CGP 9606 14:73644875-73714372
GeneTranscriptPositionBiotype
ENSG00000119661 (DNAL1)
dynein, axonemal, light chain 1 		ENST00000311089 (DNAL1-002) 73645009-73697760 protein_coding
ENST00000553645 (DNAL1-001) 73644999-73703732 protein_coding
ENST00000554113 (DNAL1-004) 73644875-73689493 protein_coding
ENST00000554159 (DNAL1-007) 73658862-73696075 nonsense_mediated_decay
ENST00000554339 (DNAL1-009) 73645018-73696156 protein_coding
ENST00000554871 (DNAL1-010) 73645027-73695942 protein_coding
ENST00000555631 (DNAL1-005) 73644991-73689515 protein_coding
ENST00000555919 (DNAL1-006) 73645017-73687268 protein_coding
ENST00000559993 (DNAL1-011) 73658847-73689517 protein_coding
ENSG00000176903 (PNMA1)
paraneoplastic Ma antigen 1 		ENST00000316836 (PNMA1-001) 73711783-73714372 protein_coding
CIL_0004A0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000042523-ENSMUSG00000054383 CGP 10090 12:84114366-84148489
GeneTranscriptPositionBiotype
ENSMUSG00000042523 (Dnal1)
dynein, axonemal, light chain 1 		ENSMUST00000046340 (Dnal1-002) 84114371-84138457 protein_coding
ENSMUST00000123491 (Dnal1-001) 84114366-84143517 protein_coding
ENSMUST00000136159 (Dnal1-005) 84114391-84133984 protein_coding
ENSMUST00000140812 (Dnal1-006) 84135666-84137105 protein_coding
ENSMUST00000143711 (Dnal1-004) 84126904-84147498 retained_intron
ENSMUST00000143753 (Dnal1-007) 84114366-84139838 processed_transcript
ENSMUST00000156138 (Dnal1-003) 84114390-84140795 nonsense_mediated_decay
ENSMUSG00000054383 (Pnma1)
paraneoplastic antigen MA1 		ENSMUST00000061425 (Pnma1-001) 84146131-84148489 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004A0_0001ENSG00000119661ENST00000311089ENST00000553645ENST00000554113ENST00000554159ENST00000554339ENST00000554871ENST00000555631ENST00000555919ENST00000559993ENSG00000176903ENST00000316836CIL_0004A0_0002ENSMUSG00000042523ENSMUST00000046340ENSMUST00000123491ENSMUST00000136159ENSMUST00000140812ENSMUST00000143711ENSMUST00000143753ENSMUST00000156138ENSMUSG00000054383ENSMUST00000061425
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004A0_0001ENSG00000119661ENST00000311089ENST00000553645ENST00000554113ENST00000554339ENST00000554871ENSG00000176903ENST00000316836CIL_0004A0_0002ENSMUSG00000042523ENSMUST00000046340ENSMUST00000123491ENSMUSG00000054383ENSMUST00000061425
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000119661 ENST00000311089 N/A N/A N/A 1.764±0.00 0.404±0.00 N/A 0.380±0.00 N/A N/A N/A N/A 0.540±0.00 0.580±0.00 N/A
ENST00000553645 1.394±0.00 N/A 0.478±0.00 2.975±0.51 0.609±0.00 0.773±0.08 0.671±0.39 1.539±1.45 0.850±0.46 1.529±0.54 N/A 1.069±0.24 0.526±0.01 1.695±0.32
ENST00000554113 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.803±0.00 N/A 56.494±0.00
ENST00000554159 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554339 N/A N/A 1.748±0.00 9.725±0.00 2.403±0.00 N/A 1.966±0.00 0.886±0.00 N/A 5.392±0.00 N/A N/A N/A 7.601±0.00
ENST00000554871 N/A N/A 1.216±0.00 N/A N/A 2.997±0.00 N/A N/A N/A N/A N/A 1.061±0.00 1.758±0.00 36.447±20.40
ENST00000555631 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555919 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559993 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000176903 ENST00000316836 18.677±0.00 26.135±0.00 3.304±0.00 53.898±29.70 18.586±13.69 23.457±19.99 5.036±4.07 13.830±12.91 6.656±4.90 8.264±6.43 3.889±2.31 31.349±30.88 19.459±2.74 93.045±17.72
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000042523 ENSMUST00000046340 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.310±0.00 N/A
ENSMUST00000123491 1.974±1.13 1.955±0.56 3.606±0.39 3.924±1.39 0.726±0.17 0.855±0.09 0.967±0.41 1.235±0.67 0.221±0.11 1.482±0.74 1.418±0.10 2.425±1.59 1.282±0.37 3.280±1.48
ENSMUST00000136159 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140812 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143711 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143753 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156138 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000054383 ENSMUST00000061425 N/A N/A N/A N/A 0.869±0.00 0.213±0.00 N/A 1.406±0.03 0.143±0.06 N/A N/A N/A 0.773±0.13 12.052±3.77

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