C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004B7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000151292-ENSG00000168916 CGP 9606 5:123512099-124748807
GeneTranscriptPositionBiotype
ENSG00000151292 (CSNK1G3)
casein kinase 1, gamma 3 		ENST00000345990 (CSNK1G3-201) 123512099-123617040 protein_coding
ENST00000360683 (CSNK1G3-002) 123545634-123617045 protein_coding
ENST00000361991 (CSNK1G3-001) 123545634-123615446 protein_coding
ENST00000508708 (CSNK1G3-007) 123512191-123545956 processed_transcript
ENST00000510842 (CSNK1G3-003) 123545417-123614853 protein_coding
ENST00000511130 (CSNK1G3-005) 123512260-123614455 protein_coding
ENST00000512718 (CSNK1G3-004) 123512260-123614560 protein_coding
ENST00000514131 (CSNK1G3-006) 123552965-123557564 retained_intron
ENST00000515322 (CSNK1G3-008) 123588425-123615017 protein_coding
ENST00000521364 (CSNK1G3-009) 123545415-123615455 protein_coding
ENSG00000168916 (ZNF608)
zinc finger protein 608 		ENST00000306315 (ZNF608-001) 124636917-124745425 protein_coding
ENST00000503896 (ZNF608-007) 124643511-124744367 processed_transcript
ENST00000504926 (ZNF608-002) 124636916-124744521 protein_coding
ENST00000505686 (ZNF608-003) 124637278-124745081 nonsense_mediated_decay
ENST00000509799 (ZNF608-004) 124648237-124748807 protein_coding
ENST00000511308 (ZNF608-009) 124666271-124701269 processed_transcript
ENST00000512940 (ZNF608-008) 124744656-124746074 processed_transcript
ENST00000513985 (ZNF608-006) 124636913-124644337 processed_transcript
ENST00000513986 (ZNF608-005) 124648263-124746627 protein_coding
ENST00000613878 (ZNF608-201) 124636917-124745112 protein_coding
ENSG00000235275 (KRT18P16)
keratin 18 pseudogene 16 		ENST00000510337 (KRT18P16-001) 123636110-123637403 processed_pseudogene
ENSG00000248296 (CTD-2308B18.3)
 ENST00000503145 (CTD-2308B18.3-001) 124492775-124536348 lincRNA
ENSG00000249112 (RP11-43D2.2)
 ENST00000515092 (RP11-43D2.2-001) 124707827-124710737 antisense
ENSG00000250862 (HMGB1P29)
high mobility group box 1 pseudogene 29 		ENST00000505659 (HMGB1P29-001) 124220579-124221077 processed_pseudogene
ENSG00000251456 (RP11-436H11.5)
 ENST00000507630 (RP11-436H11.5-001) 124734618-124735175 sense_intronic
ENSG00000251662 (CTC-369A16.3)
 ENST00000510853 (CTC-369A16.3-001) 124395947-124400655 lincRNA
ENSG00000253807 (LINC01170)
long intergenic non-protein coding RNA 1170 		ENST00000519703 (LINC01170-002) 124313649-124405079 lincRNA
ENST00000520192 (LINC01170-001) 124306230-124386255 lincRNA
CIL_0004B7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000073563-ENSMUSG00000052713 CGP 10090 18:53862113-54990180
GeneTranscriptPositionBiotype
ENSMUSG00000052713 (Zfp608)
zinc finger protein 608 		ENSMUST00000064763 (Zfp608-201) 54888045-54990180 protein_coding
ENSMUSG00000069376 (Gm5507)
predicted gene 5507 		ENSMUST00000091897 (Gm5507-001) 53984321-53985328 processed_pseudogene
ENSMUSG00000073563 (Csnk1g3)
casein kinase 1, gamma 3 		ENSMUST00000069597 (Csnk1g3-201) 53862113-53955684 protein_coding
ENSMUSG00000096982 (Redrum)
Redrum, erythroid developmental long intergenic non-protein coding transcript 		ENSMUST00000181269 (Redrum-201) 54422295-54452840 lincRNA
ENSMUSG00000097707 (Gm26742)
predicted gene, 26742 		ENSMUST00000181829 (Gm26742-201) 54981435-54987689 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004B7_0001ENSG00000151292ENST00000345990ENST00000360683ENST00000361991ENST00000508708ENST00000510842ENST00000511130ENST00000512718ENST00000514131ENST00000515322ENST00000521364ENSG00000168916ENST00000306315ENST00000503896ENST00000504926ENST00000505686ENST00000509799ENST00000511308ENST00000512940ENST00000513985ENST00000513986ENST00000613878ENSG00000235275ENST00000510337ENSG00000248296ENST00000503145ENSG00000249112ENST00000515092ENSG00000250862ENST00000505659ENSG00000251456ENST00000507630ENSG00000251662ENST00000510853ENSG00000253807ENST00000519703ENST00000520192CIL_0004B7_0002ENSMUSG00000052713ENSMUST00000064763ENSMUSG00000069376ENSMUST00000091897ENSMUSG00000073563ENSMUST00000069597ENSMUSG00000096982ENSMUST00000181269ENSMUSG00000097707ENSMUST00000181829
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004B7_0001ENSG00000151292ENST00000345990ENST00000360683ENST00000361991ENST00000508708ENST00000510842ENST00000511130ENST00000521364ENSG00000168916ENST00000306315ENST00000504926ENST00000509799ENST00000513985ENST00000513986ENST00000613878ENSG00000235275ENST00000510337ENSG00000248296ENST00000503145ENSG00000249112ENST00000515092ENSG00000250862ENST00000505659ENSG00000251456ENST00000507630ENSG00000251662ENST00000510853ENSG00000253807ENST00000519703ENST00000520192CIL_0004B7_0002ENSMUSG00000052713ENSMUST00000064763ENSMUSG00000069376ENSMUST00000091897ENSMUSG00000073563ENSMUST00000069597ENSMUSG00000096982ENSMUST00000181269ENSMUSG00000097707ENSMUST00000181829
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000151292 ENST00000345990 N/A N/A N/A N/A N/A 1.535±0.00 0.872±0.00 N/A 1.255±0.00 N/A 0.043±0.00 1.496±0.61 0.854±0.27 0.952±0.00
ENST00000360683 N/A 0.515±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.367±0.38 0.537±0.00 2.528±0.00
ENST00000361991 1.802±0.00 N/A N/A 2.335±0.00 N/A 1.117±0.14 1.096±0.00 1.163±0.00 N/A N/A 0.443±0.00 3.004±0.00 1.966±0.00 5.412±0.00
ENST00000508708 N/A N/A 1.279±0.00 6.482±0.00 N/A 5.741±0.00 N/A N/A 9.147±0.00 N/A N/A N/A N/A N/A
ENST00000510842 N/A N/A N/A 5.737±0.00 6.699±0.00 2.985±0.00 3.273±0.00 4.973±0.00 5.969±0.00 7.562±0.00 N/A 3.859±0.00 N/A N/A
ENST00000511130 N/A N/A N/A N/A N/A N/A 1.332±0.00 N/A N/A N/A N/A 3.895±0.00 4.305±0.00 11.777±0.00
ENST00000512718 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514131 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515322 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521364 1.793±0.00 N/A 1.357±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 2.641±0.31 N/A 2.052±0.00
ENSG00000168916 ENST00000306315 0.233±0.00 N/A N/A 0.738±0.00 N/A N/A N/A N/A N/A N/A N/A 0.446±0.00 N/A N/A
ENST00000503896 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504926 0.399±0.00 0.953±0.00 0.857±0.00 1.227±0.69 0.691±0.00 1.085±0.00 0.433±0.24 1.387±0.00 0.107±0.00 0.944±0.00 1.830±0.00 1.396±0.79 0.700±0.50 7.068±3.18
ENST00000505686 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509799 N/A N/A N/A N/A N/A N/A 0.188±0.00 N/A N/A N/A N/A 0.811±0.00 N/A N/A
ENST00000511308 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512940 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513985 N/A N/A N/A 2.319±0.00 0.628±0.00 N/A N/A 0.838±0.00 0.295±0.00 N/A 0.239±0.00 N/A N/A N/A
ENST00000513986 N/A N/A 1.703±0.00 N/A N/A 1.714±0.00 N/A N/A N/A 2.047±0.00 N/A N/A N/A N/A
ENST00000613878 N/A N/A N/A N/A N/A N/A N/A N/A 0.184±0.00 N/A N/A 0.541±0.00 0.183±0.00 N/A
ENSG00000235275 ENST00000510337 N/A N/A N/A N/A 0.020±0.00 N/A N/A 0.096±0.00 0.017±0.00 0.057±0.00 N/A N/A 0.022±0.00 0.024±0.00
ENSG00000248296 ENST00000503145 N/A N/A N/A 0.018±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000249112 ENST00000515092 N/A 0.028±0.00 N/A 0.057±0.00 N/A N/A 0.050±0.00 N/A N/A N/A N/A N/A N/A 0.116±0.10
ENSG00000250862 ENST00000505659 N/A N/A N/A N/A N/A N/A N/A N/A 0.024±0.00 N/A N/A 0.089±0.00 N/A 0.059±0.00
ENSG00000251456 ENST00000507630 N/A N/A 0.410±0.00 0.032±0.00 0.317±0.00 N/A N/A N/A 0.332±0.00 2.442±0.00 N/A N/A N/A N/A
ENSG00000251662 ENST00000510853 N/A 0.044±0.00 N/A 0.091±0.00 N/A N/A 0.128±0.05 N/A N/A N/A N/A 0.059±0.00 N/A N/A
ENSG00000253807 ENST00000519703 N/A N/A N/A 0.242±0.00 N/A N/A 1.030±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000520192 N/A N/A N/A 0.405±0.00 N/A N/A 0.332±0.03 N/A N/A N/A 0.230±0.00 0.527±0.00 N/A 0.303±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000052713 ENSMUST00000064763 2.362±0.57 1.193±0.54 1.230±0.54 6.779±3.18 2.206±0.65 2.820±0.24 1.362±0.27 1.771±0.63 0.366±0.24 6.307±1.44 0.726±0.09 2.241±0.85 1.213±0.84 N/A
ENSMUSG00000069376 ENSMUST00000091897 0.270±0.18 0.112±0.06 0.714±0.67 0.456±0.50 0.630±0.65 0.111±0.07 0.269±0.11 0.192±0.12 0.242±0.38 0.102±0.05 0.242±0.11 0.196±0.11 0.163±0.07 0.040±0.02
ENSMUSG00000073563 ENSMUST00000069597 4.250±1.75 15.587±5.98 5.087±0.60 12.008±4.01 5.971±3.36 6.943±3.01 0.913±0.29 4.107±2.75 2.730±1.55 4.787±1.97 0.513±0.16 10.667±5.00 6.139±1.64 1.252±0.50
ENSMUSG00000096982 ENSMUST00000181269 N/A N/A N/A 0.042±0.03 N/A N/A 0.036±0.00 N/A 14.024±7.00 N/A N/A 0.014±0.00 0.286±0.21 0.037±0.00
ENSMUSG00000097707 ENSMUST00000181829 N/A N/A N/A N/A N/A N/A N/A N/A 0.077±0.01 N/A N/A N/A N/A N/A

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