C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5507
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000091897 Gm5507-001 ENSMUSG00000069376 10090 + 18:53984321-53985328 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000091897
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000091897 0.270±0.18 0.112±0.06 0.714±0.67 0.456±0.50 0.630±0.65 0.111±0.07 0.269±0.11 0.192±0.12 0.242±0.38 0.102±0.05 0.242±0.11 0.196±0.11 0.163±0.07 0.040±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004B7 CIL_0004B7_0002 CGP 18:53862113-54990180

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000058384 gapdhs-001 protein_coding Danio_rerio 0 418
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 1188
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 939
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 1162
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 1188
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 1188
ENST00000398586 GAPDHP15-001 processed_pseudogene Homo_sapiens 0 521
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 929
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 898
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 990
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 889
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 854
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 837
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 1105
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 905
ENST00000429913 GAPDHP29-001 processed_pseudogene Homo_sapiens 0 664
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 867
ENST00000434621 GAPDHP68-001 processed_pseudogene Homo_sapiens 0 885
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 809
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 628
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 667
ENST00000445880 RP1-52D1.1-001 processed_pseudogene Homo_sapiens 2e-35 150
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 556
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 1123
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 606
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 939
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 939
ENST00000481866 GAPDHP39-001 processed_pseudogene Homo_sapiens 0 619
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 817
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 887
ENST00000505218 GAPDHP40-001 processed_pseudogene Homo_sapiens 0 881
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 963
ENST00000511530 GAPDHP71-001 processed_pseudogene Homo_sapiens 0 920
ENST00000512110 AC007016.3-001 processed_pseudogene Homo_sapiens 0 300
ENST00000513369 RP11-159J3.1-001 processed_pseudogene Homo_sapiens 0 874
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 929
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 946
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 841
ENST00000520713 ANKRD46-009 processed_transcript Homo_sapiens 0 758
ENST00000524319 ANKRD46-003 processed_transcript Homo_sapiens 0 758
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 553
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 1061

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