C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004BE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000198911-ENSG00000234965 CGP 9606 22:41833079-41914667
GeneTranscriptPositionBiotype
ENSG00000198911 (SREBF2)
sterol regulatory element binding transcription factor 2 		ENST00000361204 (SREBF2-001) 41833105-41907308 protein_coding
ENST00000424354 (SREBF2-002) 41833164-41907306 nonsense_mediated_decay
ENST00000435061 (SREBF2-005) 41898676-41904973 protein_coding
ENST00000462539 (SREBF2-008) 41873689-41877396 retained_intron
ENST00000463741 (SREBF2-006) 41897068-41899188 retained_intron
ENST00000464119 (SREBF2-007) 41875431-41877366 retained_intron
ENST00000490262 (SREBF2-004) 41900083-41903003 retained_intron
ENST00000491541 (SREBF2-003) 41885596-41907306 processed_transcript
ENST00000612482 (SREBF2-201) 41833079-41907307 protein_coding
ENSG00000234965 (SHISA8)
shisa family member 8 		ENST00000457093 (SHISA8-001) 41911293-41914566 protein_coding
ENST00000621082 (SHISA8-201) 41909554-41914667 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0004BE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022463-ENSMUSG00000096883 CGP 10090 15:82147266-82212815
GeneTranscriptPositionBiotype
ENSMUSG00000022463 (Srebf2)
sterol regulatory element binding factor 2 		ENSMUST00000023100 (Srebf2-201) 82147266-82205376 protein_coding
ENSMUSG00000096883 (AI848285)
shisa family member 8 		ENSMUST00000179269 (AI848285-201) 82206952-82212815 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004BE_0001ENSG00000198911ENST00000361204ENST00000424354ENST00000435061ENST00000462539ENST00000463741ENST00000464119ENST00000490262ENST00000491541ENST00000612482ENSG00000234965ENST00000457093ENST00000621082CIL_0004BE_0002ENSMUSG00000022463ENSMUST00000023100ENSMUSG00000096883ENSMUST00000179269
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004BE_0001ENSG00000198911ENST00000361204ENST00000424354ENST00000462539ENST00000612482ENSG00000234965ENST00000457093ENST00000621082CIL_0004BE_0002ENSMUSG00000022463ENSMUST00000023100ENSMUSG00000096883ENSMUST00000179269
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000198911 ENST00000361204 12.759±0.00 21.335±0.00 N/A 24.556±14.31 9.080±6.24 10.495±6.40 10.250±9.13 11.843±8.32 11.966±9.91 17.854±14.00 7.923±7.53 24.757±13.66 21.422±2.07 14.850±6.95
ENST00000424354 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.563±0.00
ENST00000435061 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462539 N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.013±0.00 N/A N/A N/A N/A
ENST00000463741 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464119 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490262 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491541 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612482 N/A N/A N/A 5.648±0.00 N/A N/A N/A N/A 0.969±0.00 N/A N/A N/A N/A N/A
ENSG00000234965 ENST00000457093 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.825±0.00 N/A 0.458±0.00 N/A N/A
ENST00000621082 N/A 1.331±0.00 N/A 0.334±0.09 0.059±0.00 N/A 1.604±0.00 0.239±0.00 N/A N/A N/A N/A 0.101±0.01 0.098±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022463 ENSMUST00000023100 15.594±2.41 42.608±7.17 23.338±0.62 39.770±12.73 27.536±12.09 79.080±4.81 6.686±0.81 26.748±3.17 20.083±3.70 62.850±2.37 2.496±0.92 43.557±14.98 24.594±11.62 5.661±2.94
ENSMUSG00000096883 ENSMUST00000179269 0.150±0.04 0.450±0.10 0.045±0.00 1.489±0.54 1.256±0.63 0.152±0.07 0.118±0.05 0.050±0.02 0.183±0.14 0.221±0.12 0.106±0.07 8.399±4.54 0.207±0.10 0.263±0.14

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