C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004C5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000010158-ENSDARG00000010158 CGP 7955 15:32412972-32980900
GeneTranscriptPositionBiotype
ENSDARG00000010158 (nbeab)
neurobeachin b 		ENSDART00000041157 (nbeab-201) 32412972-32980900 protein_coding
ENSDART00000153557 (nbeab-002) 32627762-32629556 retained_intron
ENSDART00000153610 (nbeab-003) 32630925-32640048 retained_intron
ENSDART00000155211 (nbeab-001) 32549480-32978871 protein_coding
ENSDARG00000055089 (mab21l1)
mab-21-like 1 		ENSDART00000077405 (mab21l1-001) 32801330-32803591 protein_coding
CIL_0004C5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000172915-ENSG00000172915 CGP 9606 13:34942287-35673022
GeneTranscriptPositionBiotype
ENSG00000180660 (MAB21L1)
mab-21-like 1 (C. elegans) 		ENST00000379919 (MAB21L1-001) 35474182-35477209 protein_coding
ENSG00000221519 (AL390071.1)
 ENST00000408592 (AL390071.1-201) 35494428-35494519 miRNA
ENSG00000232795 (SCAND3P1)
SCAN domain containing 3 pseudogene 1 		ENST00000439854 (SCAND3P1-001) 35185294-35186679 processed_pseudogene
ENSG00000234835 (PHBP13)
prohibitin pseudogene 13 		ENST00000453244 (PHBP13-001) 35251070-35251829 processed_pseudogene
CIL_0004C5_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027799-ENSMUSG00000027799 CGP 10090 3:55625205-56183701
GeneTranscriptPositionBiotype
ENSMUSG00000027799 (Nbea)
neurobeachin 		ENSMUST00000029374 (Nbea-201) 55625205-56183701 protein_coding
ENSMUSG00000056947 (Mab21l1)
mab-21-like 1 (C. elegans) 		ENSMUST00000075422 (Mab21l1-201) 55782510-55785285 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004C5_0001ENSDARG00000010158ENSDART00000041157ENSDART00000153557ENSDART00000153610ENSDART00000155211ENSDARG00000055089ENSDART00000077405CIL_0004C5_0002ENSG00000180660ENST00000379919ENSG00000221519ENST00000408592ENSG00000232795ENST00000439854ENSG00000234835ENST00000453244CIL_0004C5_0003ENSMUSG00000027799ENSMUST00000029374ENSMUSG00000056947ENSMUST00000075422
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004C5_0001ENSDARG00000010158ENSDART00000041157ENSDART00000153557ENSDART00000153610ENSDART00000155211ENSDARG00000055089ENSDART00000077405CIL_0004C5_0002ENSG00000180660ENST00000379919ENSG00000221519ENST00000408592ENSG00000232795ENST00000439854ENSG00000234835ENST00000453244CIL_0004C5_0003ENSMUSG00000027799ENSMUST00000029374ENSMUSG00000056947ENSMUST00000075422
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000010158 ENSDART00000041157 N/A N/A N/A 1.318±0.14 N/A N/A 0.016±0.00 0.281±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000153557 N/A N/A N/A 2.146±0.01 N/A N/A 0.946±0.74 0.898±0.33 0.296±0.00 N/A 0.441±0.00 N/A N/A N/A
ENSDART00000153610 N/A N/A N/A N/A N/A N/A N/A N/A 0.108±0.00 N/A N/A N/A N/A N/A
ENSDART00000155211 N/A N/A N/A N/A N/A N/A 0.017±0.00 0.084±0.00 0.017±0.00 N/A 0.125±0.00 N/A N/A N/A
ENSDARG00000055089 ENSDART00000077405 N/A N/A N/A 34.831±14.28 N/A N/A 0.182±0.04 N/A 0.024±0.00 N/A 1.550±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000180660 ENST00000379919 0.470±0.00 N/A N/A N/A 0.712±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000221519 ENST00000408592 N/A N/A N/A 0.239±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000232795 ENST00000439854 N/A N/A 0.630±0.00 0.503±0.47 0.147±0.00 0.211±0.00 0.209±0.00 0.036±0.00 N/A 0.100±0.00 N/A 0.079±0.06 N/A 0.030±0.00
ENSG00000234835 ENST00000453244 N/A N/A N/A 0.059±0.00 N/A 0.324±0.00 0.119±0.10 N/A N/A N/A N/A 0.081±0.02 N/A 0.144±0.12
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027799 ENSMUST00000029374 4.053±2.02 1.707±1.04 1.253±0.62 20.773±6.79 0.840±0.48 0.706±0.27 1.083±0.21 0.949±0.68 0.151±0.08 3.072±1.26 0.234±0.04 3.357±1.36 0.304±0.12 1.340±0.81
ENSMUSG00000056947 ENSMUST00000075422 0.132±0.00 0.633±0.39 0.233±0.04 20.352±16.49 0.571±0.31 0.276±0.04 N/A N/A 0.022±0.01 0.145±0.06 0.304±0.09 0.219±0.16 0.023±0.01 0.071±0.04

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