C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: neurobeachin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027799 Nbea 10090 - 3:55625205-56183701 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000029374 Nbea-201 55625205-56183701 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029374
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029374 4.053±2.02 1.707±1.04 1.253±0.62 20.773±6.79 0.840±0.48 0.706±0.27 1.083±0.21 0.949±0.68 0.151±0.08 3.072±1.26 0.234±0.04 3.357±1.36 0.304±0.12 1.340±0.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UJ CIL_0008UJ_0002 VISTA 3:55453971-56057759
CIL_0007OM CIL_0007OM_0002 UCNEbase 3:55625197-55966169
CIL_0004C5 CIL_0004C5_0003 CGP 3:55625205-56183701

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005802 IDA trans-Golgi network
GO:0005829 IDA cytosol
GO:0005886 IDA plasma membrane
GO:0006605 ISS protein targeting
GO:0006892 NAS post-Golgi vesicle-mediated transport
GO:0008104 IDA protein localization
GO:0012505 IDA endomembrane system
GO:0019901 IDA protein kinase binding
GO:0030054 IEA cell junction
GO:0045211 NAS postsynaptic membrane
GO:0051018 NAS protein kinase A binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010158 nbeab neurobeachin b protein_coding Danio_rerio
ENSDARG00000070080 nbeaa neurobeachin a protein_coding Danio_rerio
ENSG00000172915 NBEA neurobeachin protein_coding Homo_sapiens

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