C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004CI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000132963-ENSG00000139508 CGP 9606 13:28659104-28718970
GeneTranscriptPositionBiotype
ENSG00000132963 (POMP)
proteasome maturation protein 		ENST00000380842 (POMP-001) 28659104-28678925 protein_coding
ENST00000460403 (POMP-002) 28659104-28678925 processed_transcript
ENSG00000139508 (SLC46A3)
solute carrier family 46, member 3 		ENST00000266943 (SLC46A3-003) 28700080-28718841 protein_coding
ENST00000380814 (SLC46A3-001) 28700717-28718970 protein_coding
ENST00000475385 (SLC46A3-002) 28700064-28704557 processed_transcript
ENSG00000202237 (RNU6-53P)
RNA, U6 small nuclear 53, pseudogene 		ENST00000365367 (RNU6-53P-201) 28703702-28703807 snRNA
CIL_0004CI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029649-ENSMUSG00000029650 CGP 10090 5:147860628-147894815
GeneTranscriptPositionBiotype
ENSMUSG00000029649 (Pomp)
proteasome maturation protein 		ENSMUST00000031654 (Pomp-201) 147860628-147875778 protein_coding
ENSMUSG00000029650 (Slc46a3)
solute carrier family 46, member 3 		ENSMUST00000031655 (Slc46a3-002) 147878441-147894815 protein_coding
ENSMUST00000118527 (Slc46a3-001) 147878437-147894815 protein_coding
ENSMUST00000138244 (Slc46a3-003) 147893881-147894815 protein_coding
ENSMUST00000152064 (Slc46a3-004) 147878559-147879869 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004CI_0001ENSG00000132963ENST00000380842ENST00000460403ENSG00000139508ENST00000266943ENST00000380814ENST00000475385ENSG00000202237ENST00000365367CIL_0004CI_0002ENSMUSG00000029649ENSMUST00000031654ENSMUSG00000029650ENSMUST00000031655ENSMUST00000118527ENSMUST00000138244ENSMUST00000152064
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004CI_0001ENSG00000132963ENST00000380842ENSG00000139508ENST00000266943ENST00000380814ENST00000475385ENSG00000202237ENST00000365367CIL_0004CI_0002ENSMUSG00000029649ENSMUST00000031654ENSMUSG00000029650ENSMUST00000031655ENSMUST00000118527ENSMUST00000152064
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000132963 ENST00000380842 47.906±0.00 34.582±0.00 4.383±0.00 27.966±8.84 27.696±14.67 24.083±13.64 22.038±14.23 23.743±7.97 8.308±0.19 22.428±16.04 21.125±10.11 29.356±9.26 18.853±8.20 36.818±19.12
ENST00000460403 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000139508 ENST00000266943 2.263±0.00 3.324±0.00 0.986±0.00 1.285±0.00 3.244±1.56 3.161±0.94 2.566±1.32 4.326±0.00 7.488±6.33 1.924±0.70 0.755±0.31 3.621±1.56 2.318±0.13 4.154±1.76
ENST00000380814 N/A N/A N/A 0.399±0.00 1.068±0.00 N/A 0.569±0.00 N/A N/A N/A 1.309±0.00 2.402±0.00 N/A N/A
ENST00000475385 N/A N/A N/A N/A N/A 0.496±0.00 N/A N/A N/A N/A N/A 1.472±0.28 0.481±0.00 N/A
ENSG00000202237 ENST00000365367 0.395±0.00 N/A N/A N/A N/A N/A 0.361±0.00 N/A N/A N/A N/A 2.373±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029649 ENSMUST00000031654 51.555±4.68 15.992±2.12 104.671±18.44 99.407±13.87 40.786±16.13 21.778±2.00 40.563±7.96 49.380±6.58 90.048±29.77 38.685±5.06 75.491±12.18 42.078±38.51 96.748±28.84 24.603±2.85
ENSMUSG00000029650 ENSMUST00000031655 3.150±0.75 9.074±1.24 5.231±0.54 0.667±0.05 6.098±3.25 2.944±0.86 1.299±0.10 4.189±1.26 8.601±4.92 5.296±0.46 2.323±0.59 2.077±0.87 0.753±0.54 0.671±0.43
ENSMUST00000118527 1.271±0.00 3.026±0.62 2.340±0.33 0.432±0.13 5.128±2.57 1.366±0.45 0.782±0.00 N/A 2.869±0.96 1.842±0.28 1.166±0.33 2.165±1.83 0.820±0.55 0.318±0.07
ENSMUST00000138244 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152064 4.418±2.81 11.749±1.53 N/A 0.812±0.45 17.439±6.71 5.683±0.94 2.899±0.95 5.134±1.53 9.370±4.76 6.880±1.63 N/A 6.998±1.91 0.736±0.33 0.531±0.33

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