C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004CZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000148229-ENSG00000157653 CGP 9606 9:113407235-113429684
GeneTranscriptPositionBiotype
ENSG00000148229 (POLE3)
polymerase (DNA directed), epsilon 3, accessory subunit 		ENST00000374169 (POLE3-003) 113407235-113410382 protein_coding
ENST00000374171 (POLE3-004) 113407235-113410672 protein_coding
ENST00000475080 (POLE3-002) 113408944-113410350 processed_transcript
ENST00000479871 (POLE3-001) 113407235-113410343 processed_transcript
CIL_0004CZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028394-ENSMUSG00000058046 CGP 10090 4:62522649-62547993
GeneTranscriptPositionBiotype
ENSMUSG00000028394 (Pole3)
polymerase (DNA directed), epsilon 3 (p17 subunit) 		ENSMUST00000030091 (Pole3-001) 62522649-62525068 protein_coding
ENSMUST00000128100 (Pole3-002) 62522649-62525068 nonsense_mediated_decay
ENSMUST00000129930 (Pole3-003) 62524335-62525038 retained_intron
ENSMUSG00000058046 (4933430I17Rik)
RIKEN cDNA 4933430I17 gene 		ENSMUST00000062145 (4933430I17Rik-001) 62525369-62547993 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004CZ_0001ENSG00000148229ENST00000374169ENST00000374171ENST00000475080ENST00000479871CIL_0004CZ_0002ENSMUSG00000028394ENSMUST00000030091ENSMUST00000128100ENSMUST00000129930ENSMUSG00000058046ENSMUST00000062145
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004CZ_0001ENSG00000148229ENST00000374169ENST00000374171ENST00000475080CIL_0004CZ_0002ENSMUSG00000028394ENSMUST00000030091ENSMUST00000128100ENSMUST00000129930ENSMUSG00000058046ENSMUST00000062145
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000148229 ENST00000374169 14.414±0.00 22.353±0.00 2.116±0.00 10.243±4.68 8.027±5.16 9.791±7.01 5.592±4.23 8.367±4.25 7.697±3.82 7.409±5.28 9.816±5.91 16.249±9.96 23.933±8.56 36.864±9.88
ENST00000374171 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.667±0.00 N/A N/A
ENST00000475080 N/A N/A N/A N/A 5.096±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479871 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028394 ENSMUST00000030091 14.160±0.52 16.190±3.02 13.923±0.87 18.144±1.86 8.983±0.91 7.630±1.36 6.157±0.09 11.248±0.59 19.008±14.70 10.610±1.33 8.639±0.43 16.647±5.31 32.739±9.16 45.532±28.84
ENSMUST00000128100 N/A 1.901±0.00 N/A N/A 1.059±0.00 0.892±0.01 N/A N/A 0.574±0.00 N/A N/A 1.414±0.00 N/A N/A
ENSMUST00000129930 N/A 19.050±5.55 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000058046 ENSMUST00000062145 0.094±0.09 0.095±0.04 0.103±0.00 0.365±0.03 0.127±0.02 0.123±0.11 0.018±0.00 0.115±0.03 0.088±0.04 0.089±0.04 0.039±0.01 0.191±0.09 0.239±0.17 7.663±3.18

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