C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polymerase (DNA directed), epsilon 3, accessory subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000374169 POLE3-003 ENSG00000148229 9606 - 9:113407235-113410382 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000374169
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000374169 14.414±0.00 22.353±0.00 2.116±0.00 10.243±4.68 8.027±5.16 9.791±7.01 5.592±4.23 8.367±4.25 7.697±3.82 7.409±5.28 9.816±5.91 16.249±9.96 23.933±8.56 36.864±9.88

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004CD CIL_0004CD_0001 CGP 9:113386317-113410672
CIL_0004CZ CIL_0004CZ_0001 CGP 9:113407235-113429684

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003887 IEA DNA-directed DNA polymerase activity
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005634 TAS nucleus
GO:0005671 IDA Ada2/Gcn5/Ada3 transcription activator complex
GO:0006260 TAS DNA replication
GO:0008622 IDA epsilon DNA polymerase complex
GO:0043565 IEA sequence-specific DNA binding
GO:0043966 IDA histone H3 acetylation
GO:0046982 IEA protein heterodimerization activity
GO:0071897 IEA DNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030091 Pole3-001 protein_coding Mus_musculus 0 649
ENSMUST00000128100 Pole3-002 nonsense_mediated_decay Mus_musculus 0 392
ENSMUST00000178247 Gm21827-201 protein_coding Mus_musculus 0 346
ENSMUST00000159442 Gm16546-001 processed_pseudogene Mus_musculus 0 268
ENSMUST00000129930 Pole3-003 retained_intron Mus_musculus 0 250

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