C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004F7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000205085-ENSG00000135248 CGP 9606 7:128672288-128731743
GeneTranscriptPositionBiotype
ENSG00000205085 (FAM71F2)
family with sequence similarity 71, member F2 		ENST00000434001 (FAM71F2-003) 128672293-128684246 nonsense_mediated_decay
ENST00000460349 (FAM71F2-004) 128672288-128678112 processed_transcript
ENST00000461131 (FAM71F2-006) 128683041-128686875 processed_transcript
ENST00000474069 (FAM71F2-002) 128672292-128684246 nonsense_mediated_decay
ENST00000477515 (FAM71F2-005) 128672299-128683134 protein_coding
ENST00000480462 (FAM71F2-001) 128672292-128684270 protein_coding
ENSG00000239722 (IMP3P2)
IMP3 pseudogene 2 		ENST00000489760 (IMP3P2-001) 128693450-128693924 processed_pseudogene
ENSG00000270810 (RP11-274B21.8)
 ENST00000605692 (RP11-274B21.8-001) 128687288-128687872 lincRNA
ENSG00000271344 (RP11-274B21.9)
 ENST00000605007 (RP11-274B21.9-001) 128690451-128691717 lincRNA
CIL_0004F7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000079652-ENSMUSG00000039742 CGP 10090 6:29279593-29336019
GeneTranscriptPositionBiotype
ENSMUSG00000039742 (Fam71f1)
family with sequence similarity 71, member F1 		ENSMUST00000090487 (Fam71f1-001) 29319140-29336019 protein_coding
ENSMUST00000163229 (Fam71f1-004) 29319157-29335854 nonsense_mediated_decay
ENSMUST00000164560 (Fam71f1-003) 29319157-29335854 protein_coding
ENSMUST00000166462 (Fam71f1-002) 29319199-29335854 protein_coding
ENSMUST00000168771 (Fam71f1-005) 29319140-29326726 processed_transcript
ENSMUSG00000079652 (Fam71f2)
family with sequence similarity 71, member F2 		ENSMUST00000115286 (Fam71f2-001) 29281141-29290680 protein_coding
ENSMUST00000167131 (Fam71f2-003) 29279593-29287780 protein_coding
ENSMUST00000167608 (Fam71f2-002) 29281143-29290675 nonsense_mediated_decay
ENSMUSG00000090692 (Gm17172)
predicted gene 17172 		ENSMUST00000171782 (Gm17172-001) 29322804-29323206 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004F7_0001ENSG00000205085ENST00000434001ENST00000460349ENST00000461131ENST00000474069ENST00000477515ENST00000480462ENSG00000239722ENST00000489760ENSG00000270810ENST00000605692ENSG00000271344ENST00000605007CIL_0004F7_0002ENSMUSG00000039742ENSMUST00000090487ENSMUST00000163229ENSMUST00000164560ENSMUST00000166462ENSMUST00000168771ENSMUSG00000079652ENSMUST00000115286ENSMUST00000167131ENSMUST00000167608ENSMUSG00000090692ENSMUST00000171782
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004F7_0001ENSG00000205085ENST00000434001ENST00000460349ENST00000461131ENST00000474069ENST00000477515ENST00000480462ENSG00000239722ENST00000489760ENSG00000270810ENST00000605692ENSG00000271344ENST00000605007CIL_0004F7_0002ENSMUSG00000039742ENSMUST00000090487ENSMUST00000163229ENSMUST00000164560ENSMUST00000166462ENSMUST00000168771ENSMUSG00000079652ENSMUST00000115286ENSMUST00000167131ENSMUST00000167608ENSMUSG00000090692ENSMUST00000171782
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000205085 ENST00000434001 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.354±0.60
ENST00000460349 N/A N/A 1.119±0.00 N/A 0.853±0.00 N/A N/A 0.406±0.00 0.078±0.00 0.201±0.00 N/A 0.303±0.17 0.077±0.00 3.955±1.73
ENST00000461131 0.406±0.00 1.016±0.00 N/A N/A N/A 0.221±0.13 N/A N/A 0.209±0.00 0.238±0.02 N/A 0.074±0.00 0.087±0.00 N/A
ENST00000474069 N/A N/A N/A 0.211±0.00 0.041±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477515 N/A N/A N/A N/A N/A 0.155±0.00 N/A N/A N/A N/A N/A 0.079±0.00 N/A 5.152±0.44
ENST00000480462 0.090±0.00 N/A N/A 0.291±0.00 N/A N/A N/A N/A 0.046±0.00 N/A N/A 0.131±0.02 0.060±0.00 0.581±0.04
ENSG00000239722 ENST00000489760 N/A N/A N/A N/A N/A N/A N/A N/A 0.259±0.00 N/A N/A 0.141±0.00 N/A 0.145±0.00
ENSG00000270810 ENST00000605692 N/A 0.513±0.00 N/A 0.389±0.00 1.318±0.00 N/A N/A 0.342±0.00 0.021±0.00 0.417±0.00 N/A 0.776±0.00 0.222±0.01 0.577±0.08
ENSG00000271344 ENST00000605007 0.060±0.00 0.215±0.00 N/A 0.342±0.05 0.496±0.36 0.105±0.00 0.309±0.00 0.895±0.00 0.044±0.00 0.020±0.00 0.168±0.00 0.284±0.24 0.032±0.00 0.706±0.12
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000039742 ENSMUST00000090487 N/A N/A N/A 0.009±0.00 N/A N/A N/A 0.028±0.01 0.008±0.00 N/A N/A N/A 0.114±0.06 44.189±9.36
ENSMUST00000163229 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 34.598±1.68
ENSMUST00000164560 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.289±0.00 30.617±5.31
ENSMUST00000166462 N/A N/A N/A N/A 0.060±0.00 0.041±0.00 0.040±0.02 0.043±0.02 0.008±0.00 0.048±0.02 0.035±0.00 N/A 0.127±0.13 56.884±6.45
ENSMUST00000168771 0.048±0.00 N/A 0.013±0.00 N/A N/A N/A 0.133±0.00 N/A N/A 0.057±0.00 N/A N/A N/A N/A
ENSMUSG00000079652 ENSMUST00000115286 0.232±0.00 0.086±0.00 0.437±0.13 0.502±0.24 0.225±0.07 0.239±0.09 0.252±0.06 0.127±0.06 0.234±0.13 2.115±0.00 0.090±0.00 0.296±0.18 0.193±0.04 456.293±180.79
ENSMUST00000167131 0.461±0.17 0.168±0.04 0.192±0.03 0.363±0.16 0.268±0.09 0.054±0.00 0.138±0.06 0.173±0.13 0.135±0.09 0.957±0.00 0.069±0.02 0.201±0.11 0.228±0.17 N/A
ENSMUST00000167608 N/A 0.200±0.00 N/A 0.095±0.04 0.490±0.00 0.424±0.00 N/A 0.093±0.00 0.039±0.00 N/A 0.097±0.00 0.454±0.23 0.144±0.03 111.588±0.00
ENSMUSG00000090692 ENSMUST00000171782 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.936±0.86

Loading