C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 71, member F2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000167608 Fam71f2-002 ENSMUSG00000079652 10090 + 6:29281143-29290675 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000167608
Transcript ID Adrenal Brain Breast Colon Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000167608 0.200±0.00 0.095±0.04 0.490±0.00 0.424±0.00 0.093±0.00 0.039±0.00 0.097±0.00 0.454±0.23 0.144±0.03 111.588±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004F7 CIL_0004F7_0002 CGP 6:29279593-29336019

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000434001 FAM71F2-003 nonsense_mediated_decay Homo_sapiens 0 252
ENST00000460349 FAM71F2-004 processed_transcript Homo_sapiens 0 252
ENST00000474069 FAM71F2-002 nonsense_mediated_decay Homo_sapiens 0 252
ENST00000477515 FAM71F2-005 protein_coding Homo_sapiens 0 250
ENST00000480462 FAM71F2-001 protein_coding Homo_sapiens 0 250

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