C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 71, member F1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039742 Fam71f1 10090 + 6:29319140-29336019 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000090487 Fam71f1-001 29319140-29336019 protein_coding
  ENSMUST00000163229 Fam71f1-004 29319157-29335854 nonsense_mediated_decay
  ENSMUST00000164560 Fam71f1-003 29319157-29335854 protein_coding
  ENSMUST00000166462 Fam71f1-002 29319199-29335854 protein_coding
  ENSMUST00000168771 Fam71f1-005 29319140-29326726 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMusclePlacentaTestisENSMUST00000090487ENSMUST00000163229ENSMUST00000164560ENSMUST00000166462ENSMUST00000168771
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Placenta Testis
ENSMUST00000090487 N/A N/A 0.009±0.00 N/A N/A N/A 0.028±0.01 0.008±0.00 N/A N/A 0.114±0.06 44.189±9.36
ENSMUST00000163229 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 34.598±1.68
ENSMUST00000164560 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.289±0.00 30.617±5.31
ENSMUST00000166462 N/A N/A N/A 0.060±0.00 0.041±0.00 0.040±0.02 0.043±0.02 0.008±0.00 0.048±0.02 0.035±0.00 0.127±0.13 56.884±6.45
ENSMUST00000168771 0.048±0.00 0.013±0.00 N/A N/A N/A 0.133±0.00 N/A N/A 0.057±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004F7 CIL_0004F7_0002 CGP 6:29279593-29336019
CIL_0004FD CIL_0004FD_0002 CGP 6:29319140-29377110

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000135248 FAM71F1 family with sequence similarity 71, member F1 protein_coding Homo_sapiens

Loading