C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SLAIN motif family, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000418532 SLAIN1-203 ENSG00000139737 9606 + 13:77697854-77764242 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonKidneyLiverLungMuscleOvaryENST00000418532
Transcript ID Adipose Brain Colon Kidney Liver Lung Muscle Ovary
ENST00000418532 0.382±0.00 11.710±0.14 0.213±0.00 0.477±0.00 0.346±0.00 1.035±0.00 0.218±0.00 1.394±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00086M CIL_00086M_0001 VISTA 13:77531993-78133579
CIL_0004FX CIL_0004FX_0002 CGP 13:77535674-77764242
CIL_00004C CIL_00004C_0001 CGP 13:77697854-77919768

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000069443 Slain1-001 protein_coding Mus_musculus 0 1410
ENSMUST00000159456 Slain1-003 protein_coding Mus_musculus 0 1266
ENSMUST00000160805 Slain1-002 protein_coding Mus_musculus 0 776
ENSMUST00000162818 Slain1-004 protein_coding Mus_musculus 0 699

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