C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: carbohydrate sulfotransferase 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027249 Chst10-201 ENSMUSG00000026080 10090 - 1:38863877-38898160 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027249
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027249 0.752±0.54 0.450±0.27 1.750±0.26 8.371±2.29 0.836±0.41 0.485±0.11 0.094±0.03 0.119±0.04 0.031±0.02 0.120±0.04 0.103±0.10 2.386±0.83 0.360±0.15 0.591±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004HM CIL_0004HM_0002 CGP 1:38793669-38898160
CIL_0004HJ CIL_0004HJ_0002 CGP 1:38863877-38950278

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005794 IEA Golgi apparatus
GO:0007612 IMP learning
GO:0007616 IMP long-term memory
GO:0008146 IMP sulfotransferase activity
GO:0016021 IEA integral component of membrane
GO:0016051 IEA carbohydrate biosynthetic process
GO:0016232 IEA HNK-1 sulfotransferase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264249 CHST10-001 protein_coding Homo_sapiens 0 1216
ENST00000409046 CHST10-005 protein_coding Homo_sapiens 0 459
ENST00000409701 CHST10-002 protein_coding Homo_sapiens 0 1210
ENST00000418201 CHST10-003 protein_coding Homo_sapiens 0 239
ENST00000420858 CHST10-004 protein_coding Homo_sapiens 0 424
ENST00000421474 CHST10-010 protein_coding Homo_sapiens 0 276
ENST00000435960 CHST10-007 protein_coding Homo_sapiens 5e-39 165
ENST00000448989 CHST10-006 protein_coding Homo_sapiens 0 294
ENST00000484382 CHST10-012 processed_transcript Homo_sapiens 0 233

Loading