C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0004HK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000204640-ENSG00000115539 CGP 9606 2:100470482-100576735
GeneTranscriptPositionBiotype
ENSG00000115539 (PDCL3)
phosducin-like 3
ENST00000264254 (PDCL3-001) 100562690-100576735 protein_coding
ENST00000416255 (PDCL3-003) 100563258-100571632 protein_coding
ENST00000450127 (PDCL3-002) 100568955-100572040 protein_coding
ENSG00000204637 (AC068538.2)
ENST00000376856 (AC068538.2-001) 100509277-100509612 processed_pseudogene
CIL_0004HK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000067604-ENSMUSG00000026078 CGP 10090 1:38939149-38997236
GeneTranscriptPositionBiotype
ENSMUSG00000026078 (Pdcl3)
phosducin-like 3
ENSMUST00000027247 (Pdcl3-201) 38987814-38997236 protein_coding
ENSMUSG00000067604 (Nms)
neuromedin S
ENSMUST00000088029 (Nms-001) 38939149-38950278 protein_coding
ENSMUST00000160214 (Nms-002) 38939203-38948643 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004HK_0001ENSG00000115539ENST00000264254ENST00000416255ENST00000450127ENSG00000204637ENST00000376856CIL_0004HK_0002ENSMUSG00000026078ENSMUST00000027247ENSMUSG00000067604ENSMUST00000088029ENSMUST00000160214
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004HK_0001ENSG00000115539ENST00000264254ENST00000416255ENST00000450127ENSG00000204637ENST00000376856CIL_0004HK_0002ENSMUSG00000026078ENSMUST00000027247ENSMUSG00000067604ENSMUST00000088029ENSMUST00000160214
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115539 ENST00000264254 6.193±0.00 12.946±0.00 1.029±0.00 3.530±0.29 6.199±2.63 8.383±5.53 3.498±2.09 5.158±3.83 5.570±3.45 2.206±1.25 5.098±2.78 21.712±23.17 18.546±8.68 21.672±6.77
ENST00000416255 3.100±0.00 N/A N/A 1.861±0.00 N/A N/A 1.831±0.00 N/A N/A N/A N/A N/A N/A 7.746±0.00
ENST00000450127 N/A N/A 2.794±0.00 N/A N/A 1.785±0.00 1.064±0.00 0.460±0.00 N/A 1.253±0.00 N/A N/A N/A N/A
ENSG00000204637 ENST00000376856 N/A N/A N/A 0.043±0.00 0.165±0.00 N/A 0.039±0.00 N/A N/A 0.479±0.00 N/A N/A N/A 0.051±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026078 ENSMUST00000027247 12.737±3.65 11.041±0.80 33.396±9.45 9.953±2.03 8.508±1.30 17.113±1.87 10.901±1.09 13.765±0.78 8.708±3.43 17.476±1.19 13.875±4.25 14.685±6.26 29.774±14.83 2.800±0.65
ENSMUSG00000067604 ENSMUST00000088029 N/A N/A 0.009±0.00 0.043±0.01 N/A N/A N/A N/A N/A N/A N/A N/A 0.038±0.01 0.071±0.03
ENSMUST00000160214 N/A N/A N/A 0.192±0.00 N/A N/A N/A N/A N/A N/A N/A 0.698±0.00 0.125±0.00 N/A

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