C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosducin-like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000264254 PDCL3-001 ENSG00000115539 9606 + 2:100562690-100576735 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000264254
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000264254 6.193±0.00 12.946±0.00 1.029±0.00 3.530±0.29 6.199±2.63 8.383±5.53 3.498±2.09 5.158±3.83 5.570±3.45 2.206±1.25 5.098±2.78 21.712±23.17 18.546±8.68 21.672±6.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004HK CIL_0004HK_0001 CGP 2:100470482-100576735
CIL_0004HH CIL_0004HH_0001 CGP 2:100562690-100996829

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IEA angiogenesis
GO:0001938 IMP positive regulation of endothelial cell proliferation
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0006457 IPI protein folding
GO:0006915 IEA apoptotic process
GO:0016032 IEA viral process
GO:0043184 IEA vascular endothelial growth factor receptor 2 binding
GO:0044183 IPI protein binding involved in protein folding
GO:0045766 IMP positive regulation of angiogenesis
GO:0050730 IMP regulation of peptidyl-tyrosine phosphorylation
GO:2000059 IMP negative regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027247 Pdcl3-201 protein_coding Mus_musculus 0 789

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