C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004KM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000054983-ENSG00000140030 CGP 9606 14:87837820-88014811
GeneTranscriptPositionBiotype
ENSG00000054983 (GALC)
galactosylceramidase 		ENST00000261304 (GALC-001) 87933014-87993271 protein_coding
ENST00000393568 (GALC-005) 87934681-87993178 protein_coding
ENST00000393569 (GALC-002) 87934331-87993665 protein_coding
ENST00000474294 (GALC-003) 87963272-87993154 retained_intron
ENST00000477716 (GALC-013) 87968393-87976864 retained_intron
ENST00000544807 (GALC-007) 87933723-87992838 protein_coding
ENST00000554372 (GALC-009) 87982205-87993172 nonsense_mediated_decay
ENST00000554916 (GALC-011) 87976358-87989647 processed_transcript
ENST00000555000 (GALC-008) 87837820-87980648 nonsense_mediated_decay
ENST00000555179 (GALC-014) 87934772-87949899 nonsense_mediated_decay
ENST00000555956 (GALC-015) 87987752-87988523 retained_intron
ENST00000556261 (GALC-012) 87981203-87988172 processed_transcript
ENST00000556879 (GALC-010) 87984441-87993122 nonsense_mediated_decay
ENST00000557316 (GALC-006) 87941395-87993170 nonsense_mediated_decay
ENST00000557520 (GALC-016) 87959553-87965623 processed_transcript
ENST00000622264 (GALC-017) 87963314-87993154 protein_coding
ENSG00000140030 (GPR65)
G protein-coupled receptor 65 		ENST00000267549 (GPR65-001) 88005124-88014811 protein_coding
ENSG00000258407 (RP11-300J18.2)
 ENST00000554433 (RP11-300J18.2-001) 88010787-88015611 antisense
ENSG00000258807 (RP11-1152H15.1)
 ENST00000554305 (RP11-1152H15.1-001) 87710419-87872291 lincRNA
ENST00000554519 (RP11-1152H15.1-003) 87736402-87816251 lincRNA
ENST00000556168 (RP11-1152H15.1-002) 87725955-87734298 lincRNA
ENSG00000259096 (FAM35CP)
family with sequence similarity 35, member C, pseudogene 		ENST00000554755 (FAM35CP-001) 87952527-87955203 processed_pseudogene
CIL_0004KM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021003-ENSMUSG00000021886 CGP 10090 12:98202304-98276624
GeneTranscriptPositionBiotype
ENSMUSG00000021003 (Galc)
galactosylceramidase 		ENSMUST00000021390 (Galc-201) 98202304-98259459 protein_coding
ENSMUSG00000021886 (Gpr65)
G-protein coupled receptor 65 		ENSMUST00000075072 (Gpr65-201) 98268635-98276624 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004KM_0001ENSG00000054983ENST00000261304ENST00000393568ENST00000393569ENST00000474294ENST00000477716ENST00000544807ENST00000554372ENST00000554916ENST00000555000ENST00000555179ENST00000555956ENST00000556261ENST00000556879ENST00000557316ENST00000557520ENST00000622264ENSG00000140030ENST00000267549ENSG00000258407ENST00000554433ENSG00000258807ENST00000554305ENST00000554519ENST00000556168ENSG00000259096ENST00000554755CIL_0004KM_0002ENSMUSG00000021003ENSMUST00000021390ENSMUSG00000021886ENSMUST00000075072
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004KM_0001ENSG00000054983ENST00000261304ENST00000393568ENST00000393569ENST00000554916ENST00000555179ENST00000557316ENSG00000140030ENST00000267549ENSG00000258407ENST00000554433ENSG00000258807ENST00000554305ENST00000554519ENST00000556168ENSG00000259096ENST00000554755CIL_0004KM_0002ENSMUSG00000021003ENSMUST00000021390ENSMUSG00000021886ENSMUST00000075072
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000054983 ENST00000261304 5.451±0.00 1.871±0.00 1.943±0.00 9.114±4.79 2.901±0.47 2.336±1.35 3.183±2.05 6.645±0.00 1.555±0.05 7.090±2.43 0.860±0.00 3.636±1.43 4.452±1.48 3.868±0.00
ENST00000393568 N/A N/A N/A 1.951±0.00 2.280±0.00 0.875±0.00 N/A N/A 1.178±0.00 N/A N/A N/A N/A N/A
ENST00000393569 N/A N/A 0.944±0.00 N/A N/A N/A N/A N/A 0.702±0.00 N/A 1.539±0.00 1.835±0.00 N/A 1.910±0.00
ENST00000474294 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477716 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544807 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554372 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554916 N/A N/A N/A N/A N/A N/A 4.207±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000555000 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555179 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.436±0.00 N/A N/A N/A
ENST00000555956 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556879 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557316 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.564±0.00 0.423±0.00 N/A N/A N/A
ENST00000557520 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622264 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000140030 ENST00000267549 0.222±0.00 1.807±0.00 0.103±0.00 0.215±0.12 0.711±0.42 0.371±0.27 0.211±0.05 0.533±0.07 0.380±0.06 1.797±0.71 0.029±0.00 0.341±0.07 0.789±0.05 0.246±0.09
ENSG00000258407 ENST00000554433 N/A N/A N/A N/A 0.641±0.00 N/A N/A 1.057±0.00 N/A N/A N/A N/A N/A 1.056±0.00
ENSG00000258807 ENST00000554305 N/A N/A 0.056±0.00 N/A N/A N/A 0.133±0.00 N/A N/A N/A N/A N/A N/A 0.027±0.00
ENST00000554519 0.418±0.00 1.177±0.00 N/A 0.804±0.00 0.412±0.00 0.396±0.00 0.519±0.00 0.271±0.00 0.227±0.00 0.177±0.00 0.196±0.00 0.673±0.00 N/A 0.572±0.00
ENST00000556168 N/A 0.313±0.00 N/A 0.341±0.00 N/A N/A N/A 0.162±0.00 N/A 0.223±0.00 N/A N/A N/A 0.722±0.17
ENSG00000259096 ENST00000554755 0.004±0.00 0.028±0.00 N/A 0.040±0.00 0.068±0.06 0.165±0.00 0.015±0.00 N/A 0.050±0.00 0.236±0.00 0.003±0.00 0.503±0.00 N/A 0.012±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021003 ENSMUST00000021390 6.111±1.32 6.294±1.60 3.744±0.13 5.798±0.62 4.607±1.11 3.049±0.50 2.052±0.54 24.836±1.53 1.566±0.52 6.359±0.44 0.988±0.32 11.870±1.92 2.708±0.78 7.027±2.21
ENSMUSG00000021886 ENSMUST00000075072 1.645±0.69 0.545±0.25 0.964±0.02 0.117±0.01 3.260±0.71 0.769±0.25 0.347±0.05 0.609±0.15 1.649±1.02 1.345±0.09 0.081±0.08 1.043±0.39 0.345±0.24 1.003±0.07

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