C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004KM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000054983-ENSG00000140030 CGP 9606 14:87837820-88014811
GeneTranscriptPositionBiotype
ENSG00000054983 (GALC)
galactosylceramidase 		ENST00000261304 (GALC-001) 87933014-87993271 protein_coding
ENST00000393568 (GALC-005) 87934681-87993178 protein_coding
ENST00000393569 (GALC-002) 87934331-87993665 protein_coding
ENST00000474294 (GALC-003) 87963272-87993154 retained_intron
ENST00000477716 (GALC-013) 87968393-87976864 retained_intron
ENST00000544807 (GALC-007) 87933723-87992838 protein_coding
ENST00000554372 (GALC-009) 87982205-87993172 nonsense_mediated_decay
ENST00000554916 (GALC-011) 87976358-87989647 processed_transcript
ENST00000555000 (GALC-008) 87837820-87980648 nonsense_mediated_decay
ENST00000555179 (GALC-014) 87934772-87949899 nonsense_mediated_decay
ENST00000555956 (GALC-015) 87987752-87988523 retained_intron
ENST00000556261 (GALC-012) 87981203-87988172 processed_transcript
ENST00000556879 (GALC-010) 87984441-87993122 nonsense_mediated_decay
ENST00000557316 (GALC-006) 87941395-87993170 nonsense_mediated_decay
ENST00000557520 (GALC-016) 87959553-87965623 processed_transcript
ENST00000622264 (GALC-017) 87963314-87993154 protein_coding
ENSG00000140030 (GPR65)
G protein-coupled receptor 65 		ENST00000267549 (GPR65-001) 88005124-88014811 protein_coding
ENSG00000258407 (RP11-300J18.2)
 ENST00000554433 (RP11-300J18.2-001) 88010787-88015611 antisense
ENSG00000258807 (RP11-1152H15.1)
 ENST00000554305 (RP11-1152H15.1-001) 87710419-87872291 lincRNA
ENST00000554519 (RP11-1152H15.1-003) 87736402-87816251 lincRNA
ENST00000556168 (RP11-1152H15.1-002) 87725955-87734298 lincRNA
ENSG00000259096 (FAM35CP)
family with sequence similarity 35, member C, pseudogene 		ENST00000554755 (FAM35CP-001) 87952527-87955203 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0004KM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021003-ENSMUSG00000021886 CGP 10090 12:98202304-98276624
GeneTranscriptPositionBiotype
ENSMUSG00000021003 (Galc)
galactosylceramidase 		ENSMUST00000021390 (Galc-201) 98202304-98259459 protein_coding
ENSMUSG00000021886 (Gpr65)
G-protein coupled receptor 65 		ENSMUST00000075072 (Gpr65-201) 98268635-98276624 protein_coding

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004KM_0001ENSG00000054983ENST00000261304ENST00000393568ENST00000393569ENST00000474294ENST00000477716ENST00000544807ENST00000554372ENST00000554916ENST00000555000ENST00000555179ENST00000555956ENST00000556261ENST00000556879ENST00000557316ENST00000557520ENST00000622264ENSG00000140030ENST00000267549ENSG00000258407ENST00000554433ENSG00000258807ENST00000554305ENST00000554519ENST00000556168ENSG00000259096ENST00000554755CIL_0004KM_0002ENSMUSG00000021003ENSMUST00000021390ENSMUSG00000021886ENSMUST00000075072
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004KM_0001ENSG00000054983ENST00000261304ENST00000393568ENST00000393569ENST00000554916ENST00000555179ENST00000557316ENSG00000140030ENST00000267549ENSG00000258407ENST00000554433ENSG00000258807ENST00000554305ENST00000554519ENST00000556168ENSG00000259096ENST00000554755CIL_0004KM_0002ENSMUSG00000021003ENSMUST00000021390ENSMUSG00000021886ENSMUST00000075072
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000054983 ENST00000261304 5.451±0.00 1.871±0.00 1.943±0.00 9.114±4.79 2.901±0.47 2.336±1.35 3.183±2.05 6.645±0.00 1.555±0.05 7.090±2.43 0.860±0.00 3.636±1.43 4.452±1.48 3.868±0.00
ENST00000393568 N/A N/A N/A 1.951±0.00 2.280±0.00 0.875±0.00 N/A N/A 1.178±0.00 N/A N/A N/A N/A N/A
ENST00000393569 N/A N/A 0.944±0.00 N/A N/A N/A N/A N/A 0.702±0.00 N/A 1.539±0.00 1.835±0.00 N/A 1.910±0.00
ENST00000474294 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477716 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544807 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554372 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554916 N/A N/A N/A N/A N/A N/A 4.207±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000555000 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555179 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.436±0.00 N/A N/A N/A
ENST00000555956 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556879 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557316 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.564±0.00 0.423±0.00 N/A N/A N/A
ENST00000557520 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622264 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000140030 ENST00000267549 0.222±0.00 1.807±0.00 0.103±0.00 0.215±0.12 0.711±0.42 0.371±0.27 0.211±0.05 0.533±0.07 0.380±0.06 1.797±0.71 0.029±0.00 0.341±0.07 0.789±0.05 0.246±0.09
ENSG00000258407 ENST00000554433 N/A N/A N/A N/A 0.641±0.00 N/A N/A 1.057±0.00 N/A N/A N/A N/A N/A 1.056±0.00
ENSG00000258807 ENST00000554305 N/A N/A 0.056±0.00 N/A N/A N/A 0.133±0.00 N/A N/A N/A N/A N/A N/A 0.027±0.00
ENST00000554519 0.418±0.00 1.177±0.00 N/A 0.804±0.00 0.412±0.00 0.396±0.00 0.519±0.00 0.271±0.00 0.227±0.00 0.177±0.00 0.196±0.00 0.673±0.00 N/A 0.572±0.00
ENST00000556168 N/A 0.313±0.00 N/A 0.341±0.00 N/A N/A N/A 0.162±0.00 N/A 0.223±0.00 N/A N/A N/A 0.722±0.17
ENSG00000259096 ENST00000554755 0.004±0.00 0.028±0.00 N/A 0.040±0.00 0.068±0.06 0.165±0.00 0.015±0.00 N/A 0.050±0.00 0.236±0.00 0.003±0.00 0.503±0.00 N/A 0.012±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021003 ENSMUST00000021390 6.111±1.32 6.294±1.60 3.744±0.13 5.798±0.62 4.607±1.11 3.049±0.50 2.052±0.54 24.836±1.53 1.566±0.52 6.359±0.44 0.988±0.32 11.870±1.92 2.708±0.78 7.027±2.21
ENSMUSG00000021886 ENSMUST00000075072 1.645±0.69 0.545±0.25 0.964±0.02 0.117±0.01 3.260±0.71 0.769±0.25 0.347±0.05 0.609±0.15 1.649±1.02 1.345±0.09 0.081±0.08 1.043±0.39 0.345±0.24 1.003±0.07

Loading