C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004PB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000085871-ENSG00000196782 CGP 9606 4:139665768-140154184
GeneTranscriptPositionBiotype
ENSG00000085871 (MGST2)
microsomal glutathione S-transferase 2 		ENST00000265498 (MGST2-001) 139665768-139704253 protein_coding
ENST00000502587 (MGST2-005) 139665997-139679124 retained_intron
ENST00000503816 (MGST2-002) 139666016-139731435 nonsense_mediated_decay
ENST00000506797 (MGST2-006) 139665835-139704224 protein_coding
ENST00000515067 (MGST2-004) 139666028-139704068 processed_transcript
ENST00000515137 (MGST2-003) 139665933-139740745 processed_transcript
ENST00000616265 (MGST2-201) 139665768-139740745 protein_coding
ENSG00000178458 (H3F3AP6)
H3 histone, family 3A, pseudogene 6 		ENST00000230495 (H3F3AP6-001) 139698144-139698554 processed_pseudogene
ENSG00000201533 (RN7SKP237)
RNA, 7SK small nuclear pseudogene 237 		ENST00000364663 (RN7SKP237-201) 139685127-139685427 misc_RNA
ENSG00000250698 (RP11-392B6.1)
 ENST00000509184 (RP11-392B6.1-002) 140128015-140134565 antisense
ENSG00000252233 (RN7SKP253)
RNA, 7SK small nuclear pseudogene 253 		ENST00000516424 (RN7SKP253-201) 139794125-139794433 misc_RNA

Homo sapiens Ensembl (GRCh38)

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CIL_0004PB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000074604-ENSMUSG00000061143 CGP 10090 3:51660360-52104891
GeneTranscriptPositionBiotype
ENSMUSG00000061143 (Maml3)
mastermind like 3 (Drosophila) 		ENSMUST00000118075 (Maml3-002) 51689437-51796535 protein_coding
ENSMUST00000121440 (Maml3-001) 51687611-52104891 protein_coding
ENSMUSG00000065070 (n-R5s196)
nuclear encoded rRNA 5S 196 		ENSMUST00000083136 (n-R5s196-201) 51828912-51829028 rRNA
ENSMUSG00000074603 (Gm10729)
predicted gene 10729 		ENSMUST00000099104 (Gm10729-201) 51693771-51695090 protein_coding
ENSMUSG00000074604 (Mgst2)
microsomal glutathione S-transferase 2 		ENSMUST00000099106 (Mgst2-001) 51661179-51682675 protein_coding
ENSMUST00000159400 (Mgst2-009) 51671466-51682670 processed_transcript
ENSMUST00000159554 (Mgst2-005) 51677560-51682674 processed_transcript
ENSMUST00000160753 (Mgst2-003) 51660360-51681807 processed_transcript
ENSMUST00000161230 (Mgst2-002) 51675136-51682674 retained_intron
ENSMUST00000161590 (Mgst2-008) 51661227-51682670 protein_coding
ENSMUST00000161627 (Mgst2-006) 51661178-51677076 processed_transcript
ENSMUST00000162125 (Mgst2-004) 51671915-51682519 processed_transcript
ENSMUST00000162195 (Mgst2-007) 51661215-51662970 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004PB_0001ENSG00000085871ENST00000265498ENST00000502587ENST00000503816ENST00000506797ENST00000515067ENST00000515137ENST00000616265ENSG00000178458ENST00000230495ENSG00000201533ENST00000364663ENSG00000250698ENST00000509184ENSG00000252233ENST00000516424CIL_0004PB_0002ENSMUSG00000061143ENSMUST00000118075ENSMUST00000121440ENSMUSG00000065070ENSMUST00000083136ENSMUSG00000074603ENSMUST00000099104ENSMUSG00000074604ENSMUST00000099106ENSMUST00000159400ENSMUST00000159554ENSMUST00000160753ENSMUST00000161230ENSMUST00000161590ENSMUST00000161627ENSMUST00000162125ENSMUST00000162195
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004PB_0001ENSG00000085871ENST00000265498ENST00000506797ENST00000515067ENSG00000178458ENST00000230495ENSG00000201533ENST00000364663ENSG00000250698ENST00000509184ENSG00000252233ENST00000516424CIL_0004PB_0002ENSMUSG00000061143ENSMUST00000118075ENSMUST00000121440ENSMUSG00000065070ENSMUST00000083136ENSMUSG00000074603ENSMUST00000099104ENSMUSG00000074604ENSMUST00000099106ENSMUST00000159400ENSMUST00000159554ENSMUST00000160753ENSMUST00000161230ENSMUST00000161590ENSMUST00000161627ENSMUST00000162125
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000085871 ENST00000265498 43.165±0.00 44.720±0.00 N/A 3.878±1.05 29.001±0.00 27.642±19.30 20.634±15.57 31.090±3.48 40.648±36.82 9.505±5.60 3.961±2.03 22.311±9.64 41.309±23.65 25.670±18.67
ENST00000502587 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503816 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506797 N/A N/A 4.485±0.00 3.355±0.00 5.930±0.00 N/A 22.893±0.00 N/A N/A 12.105±0.00 3.914±0.00 36.095±0.00 13.436±0.00 19.718±0.00
ENST00000515067 N/A N/A N/A N/A N/A N/A N/A N/A 36.112±0.00 N/A 4.393±1.36 N/A N/A N/A
ENST00000515137 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000616265 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000178458 ENST00000230495 0.148±0.00 0.310±0.00 0.208±0.00 0.173±0.00 0.833±0.62 0.811±0.71 N/A 1.562±1.45 0.047±0.00 0.050±0.00 0.045±0.00 0.145±0.00 0.322±0.20 0.095±0.00
ENSG00000201533 ENST00000364663 0.067±0.00 0.716±0.00 N/A 0.080±0.00 0.529±0.00 1.022±0.00 0.194±0.00 0.805±0.59 1.914±0.00 N/A N/A 1.739±0.00 N/A 0.394±0.00
ENSG00000250698 ENST00000509184 0.151±0.00 N/A N/A 0.368±0.00 0.095±0.00 N/A 0.054±0.02 N/A 0.050±0.00 N/A N/A 0.024±0.00 N/A 0.141±0.12
ENSG00000252233 ENST00000516424 N/A N/A N/A N/A 0.503±0.00 1.155±0.00 N/A N/A 1.067±0.95 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000061143 ENSMUST00000118075 N/A 1.429±0.12 N/A N/A N/A 2.221±0.37 N/A N/A 0.118±0.03 N/A N/A 2.676±0.80 17.597±2.92 0.538±0.00
ENSMUST00000121440 1.083±0.52 3.603±0.24 1.999±0.40 2.913±1.72 1.684±0.79 4.146±0.45 0.858±0.16 1.565±0.25 0.439±0.24 5.590±0.64 0.468±0.12 3.176±0.63 8.698±4.31 0.258±0.11
ENSMUSG00000065070 ENSMUST00000083136 N/A N/A N/A N/A N/A N/A N/A 1606.070±0.00 N/A N/A N/A N/A N/A N/A
ENSMUSG00000074603 ENSMUST00000099104 0.026±0.00 0.056±0.00 0.188±0.07 0.108±0.07 0.069±0.01 0.144±0.05 0.023±0.00 0.047±0.01 0.038±0.01 0.192±0.14 N/A 0.117±0.06 0.150±0.04 0.159±0.10
ENSMUSG00000074604 ENSMUST00000099106 1.576±0.59 1.919±0.64 6.473±1.54 N/A 1.772±0.64 7.847±1.49 0.211±0.09 0.136±0.06 2.959±0.68 1.040±0.21 0.319±0.07 9.013±14.34 6.136±4.14 N/A
ENSMUST00000159400 0.394±0.00 N/A N/A 0.060±0.04 N/A N/A 0.103±0.03 0.071±0.00 0.087±0.00 N/A N/A 0.359±0.00 0.965±0.00 1.163±0.00
ENSMUST00000159554 N/A N/A N/A N/A N/A N/A N/A 0.246±0.00 N/A N/A 0.427±0.13 N/A 7.201±0.55 10.260±0.00
ENSMUST00000160753 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.440±0.00 N/A N/A N/A
ENSMUST00000161230 0.212±0.08 1.473±0.46 2.879±1.89 0.018±0.01 0.731±0.23 5.071±1.26 0.057±0.05 0.052±0.02 0.482±0.31 0.604±0.23 0.080±0.05 1.314±2.42 0.876±0.84 0.845±0.37
ENSMUST00000161590 N/A N/A N/A N/A N/A N/A N/A 0.108±0.00 N/A N/A 0.303±0.12 N/A 2.246±0.51 N/A
ENSMUST00000161627 N/A N/A N/A N/A N/A N/A N/A 0.170±0.01 N/A N/A N/A 0.544±0.14 2.984±0.27 N/A
ENSMUST00000162125 N/A N/A N/A N/A N/A N/A 0.398±0.00 N/A N/A N/A 0.188±0.00 0.988±0.05 N/A N/A
ENSMUST00000162195 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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