C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004PX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000165071-ENSG00000129292 CGP 9606 8:132685007-132848807
GeneTranscriptPositionBiotype
ENSG00000129292 (PHF20L1)
PHD finger protein 20-like 1 		ENST00000220847 (PHF20L1-201) 132775358-132845923 protein_coding
ENST00000315808 (PHF20L1-001) 132775400-132825341 retained_intron
ENST00000337920 (PHF20L1-002) 132775408-132812316 protein_coding
ENST00000361997 (PHF20L1-009) 132775375-132818970 retained_intron
ENST00000395374 (PHF20L1-004) 132803541-132813188 retained_intron
ENST00000395376 (PHF20L1-010) 132775580-132812316 protein_coding
ENST00000395379 (PHF20L1-003) 132775375-132811888 protein_coding
ENST00000395383 (PHF20L1-011) 132775372-132825334 retained_intron
ENST00000395386 (PHF20L1-008) 132775384-132848807 protein_coding
ENST00000395390 (PHF20L1-015) 132777792-132848807 protein_coding
ENST00000460236 (PHF20L1-014) 132817408-132847580 nonsense_mediated_decay
ENST00000469979 (PHF20L1-007) 132806381-132825371 retained_intron
ENST00000477051 (PHF20L1-013) 132841553-132847587 retained_intron
ENST00000485595 (PHF20L1-005) 132775398-132799929 retained_intron
ENST00000486199 (PHF20L1-006) 132777823-132825337 nonsense_mediated_decay
ENST00000493126 (PHF20L1-012) 132836345-132837816 retained_intron
ENST00000521038 (PHF20L1-017) 132799159-132811084 nonsense_mediated_decay
ENST00000522253 (PHF20L1-018) 132816784-132824057 retained_intron
ENST00000522580 (PHF20L1-016) 132777789-132798816 protein_coding
ENST00000622263 (PHF20L1-202) 132775358-132845923 protein_coding
ENSG00000165071 (TMEM71)
transmembrane protein 71 		ENST00000356838 (TMEM71-001) 132709948-132760582 protein_coding
ENST00000377901 (TMEM71-002) 132709948-132760582 protein_coding
ENST00000517538 (TMEM71-009) 132747044-132760576 processed_transcript
ENST00000519016 (TMEM71-008) 132747014-132760630 protein_coding
ENST00000519187 (TMEM71-005) 132751802-132760548 protein_coding
ENST00000519304 (TMEM71-004) 132751824-132760582 protein_coding
ENST00000522334 (TMEM71-007) 132746948-132760630 protein_coding
ENST00000522594 (TMEM71-006) 132758374-132760712 retained_intron
ENST00000522780 (TMEM71-010) 132685007-132727986 protein_coding
ENST00000523829 (TMEM71-003) 132709945-132760561 protein_coding
ENST00000524079 (TMEM71-011) 132685007-132702239 processed_transcript
ENSG00000270137 (CTC-137K3.1)
 ENST00000602328 (CTC-137K3.1-001) 132826179-132826903 sense_intronic
CIL_0004PX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000036944-ENSMUSG00000072501 CGP 10090 15:66526212-66645255
GeneTranscriptPositionBiotype
ENSMUSG00000036944 (Tmem71)
transmembrane protein 71 		ENSMUST00000048372 (Tmem71-201) 66526212-66561046 protein_coding
ENSMUSG00000072501 (Phf20l1)
PHD finger protein 20-like 1 		ENSMUST00000048188 (Phf20l1-201) 66577572-66645255 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004PX_0001ENSG00000129292ENST00000220847ENST00000315808ENST00000337920ENST00000361997ENST00000395374ENST00000395376ENST00000395379ENST00000395383ENST00000395386ENST00000395390ENST00000460236ENST00000469979ENST00000477051ENST00000485595ENST00000486199ENST00000493126ENST00000521038ENST00000522253ENST00000522580ENST00000622263ENSG00000165071ENST00000356838ENST00000377901ENST00000517538ENST00000519016ENST00000519187ENST00000519304ENST00000522334ENST00000522594ENST00000522780ENST00000523829ENST00000524079ENSG00000270137ENST00000602328CIL_0004PX_0002ENSMUSG00000036944ENSMUST00000048372ENSMUSG00000072501ENSMUST00000048188
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004PX_0001ENSG00000129292ENST00000220847ENST00000315808ENST00000361997ENST00000395374ENST00000395383ENST00000395386ENST00000395390ENST00000460236ENST00000469979ENST00000485595ENST00000622263ENSG00000165071ENST00000356838ENST00000377901ENST00000517538ENST00000519016ENST00000519187ENST00000519304ENST00000522334ENST00000522780ENST00000523829ENST00000524079ENSG00000270137ENST00000602328CIL_0004PX_0002ENSMUSG00000036944ENSMUST00000048372ENSMUSG00000072501ENSMUST00000048188
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000129292 ENST00000220847 1.685±0.00 N/A 2.099±0.00 N/A N/A 3.668±0.00 2.269±0.81 1.344±0.00 3.790±0.00 4.457±0.00 1.841±0.00 3.460±1.35 3.371±0.00 4.058±0.00
ENST00000315808 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.259±0.00 N/A
ENST00000337920 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000361997 N/A N/A N/A 2.552±0.00 4.020±0.00 3.211±0.00 N/A N/A N/A N/A N/A 4.364±0.00 N/A N/A
ENST00000395374 N/A N/A N/A 4.218±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000395376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000395379 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000395383 N/A N/A N/A N/A 3.450±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000395386 1.419±0.00 N/A N/A N/A 1.206±0.00 1.331±0.00 3.094±0.00 N/A 0.653±0.00 0.871±0.00 1.175±0.79 1.163±0.00 0.957±0.00 N/A
ENST00000395390 N/A 2.138±0.00 N/A 1.553±0.44 1.955±0.52 1.295±0.00 2.018±0.51 3.709±0.00 1.469±0.00 N/A 1.992±0.00 3.218±0.65 1.530±0.08 4.075±1.25
ENST00000460236 1.257±0.00 2.439±0.00 N/A 1.639±0.00 1.278±0.00 1.012±0.00 N/A 3.386±0.00 N/A N/A 0.516±0.00 2.704±0.00 1.852±0.00 3.781±0.00
ENST00000469979 N/A N/A N/A 1.522±0.00 2.308±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485595 N/A N/A 3.105±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486199 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493126 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521038 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522253 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522580 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622263 N/A N/A N/A N/A N/A N/A N/A 1.544±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000165071 ENST00000356838 N/A N/A 0.030±0.00 0.044±0.04 0.562±0.24 1.381±0.00 1.395±0.00 N/A N/A 1.058±0.48 N/A 1.139±0.85 0.460±0.00 N/A
ENST00000377901 N/A 0.598±0.00 N/A 0.015±0.00 N/A N/A 1.175±0.35 0.227±0.00 0.102±0.02 0.608±0.13 N/A 0.744±0.09 0.424±0.26 0.441±0.00
ENST00000517538 N/A N/A N/A N/A N/A N/A N/A N/A 0.155±0.00 N/A N/A 5.175±0.00 0.347±0.12 N/A
ENST00000519016 N/A N/A N/A N/A N/A 0.747±0.00 N/A N/A N/A N/A 0.498±0.00 N/A N/A N/A
ENST00000519187 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.462±0.00
ENST00000519304 N/A N/A N/A 0.160±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522334 N/A N/A N/A N/A 0.686±0.00 1.518±0.00 N/A N/A 0.272±0.00 N/A N/A 4.565±0.00 0.164±0.00 0.338±0.00
ENST00000522594 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522780 N/A N/A N/A N/A 0.795±0.00 N/A N/A N/A N/A N/A 0.515±0.00 N/A N/A N/A
ENST00000523829 1.107±0.00 0.382±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.054±0.00 0.282±0.00 N/A 0.120±0.00
ENST00000524079 N/A N/A N/A 0.132±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000270137 ENST00000602328 0.056±0.00 N/A N/A 0.121±0.05 0.096±0.08 0.135±0.07 0.253±0.24 0.458±0.00 N/A 0.202±0.00 0.088±0.00 0.072±0.05 0.026±0.00 0.080±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000036944 ENSMUST00000048372 0.814±0.29 3.456±0.99 1.198±0.16 0.049±0.01 4.076±1.06 0.248±0.05 1.668±0.36 0.443±0.06 0.268±0.17 4.204±0.18 0.417±0.08 1.834±0.79 0.131±0.12 0.063±0.02
ENSMUSG00000072501 ENSMUST00000048188 1.618±0.51 3.474±0.33 8.481±0.61 10.331±2.63 2.730±0.73 1.950±0.32 2.613±0.40 1.667±0.36 2.634±1.47 4.264±0.70 3.643±1.91 7.002±4.21 2.678±1.35 1.239±0.27

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