C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0004R6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000042659-ENSDARG00000042658 CGP 7955 15:18231613-18248837
GeneTranscriptPositionBiotype
ENSDARG00000042658 (acad8)
acyl-Coenzyme A dehydrogenase family, member 8
ENSDART00000062569 (acad8-001) 18236100-18248837 protein_coding
ENSDART00000143632 (acad8-002) 18236121-18240458 processed_transcript
ENSDARG00000042659 (thyn1)
thymocyte nuclear protein 1
ENSDART00000062576 (thyn1-001) 18231613-18234902 protein_coding
CIL_0004R6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000151500-ENSG00000151498 CGP 9606 11:134248279-134265855
GeneTranscriptPositionBiotype
ENSG00000151498 (ACAD8)
acyl-CoA dehydrogenase family, member 8
ENST00000281182 (ACAD8-001) 134253495-134265855 protein_coding
ENST00000374752 (ACAD8-006) 134253561-134265850 protein_coding
ENST00000524426 (ACAD8-008) 134253558-134262612 nonsense_mediated_decay
ENST00000524502 (ACAD8-018) 134262185-134264061 protein_coding
ENST00000524547 (ACAD8-013) 134253617-134262527 processed_transcript
ENST00000524739 (ACAD8-017) 134259238-134260552 retained_intron
ENST00000525961 (ACAD8-012) 134253564-134256910 retained_intron
ENST00000526026 (ACAD8-009) 134253548-134262958 nonsense_mediated_decay
ENST00000527082 (ACAD8-002) 134253577-134259925 retained_intron
ENST00000527665 (ACAD8-015) 134257747-134261885 retained_intron
ENST00000527713 (ACAD8-016) 134258892-134261179 retained_intron
ENST00000528325 (ACAD8-010) 134256610-134260282 retained_intron
ENST00000530533 (ACAD8-005) 134253568-134260614 retained_intron
ENST00000531338 (ACAD8-011) 134256583-134265850 retained_intron
ENST00000533387 (ACAD8-004) 134253569-134265850 retained_intron
ENST00000534240 (ACAD8-014) 134253569-134259845 retained_intron
ENST00000534433 (ACAD8-007) 134253559-134260140 retained_intron
ENSG00000151500 (THYN1)
thymocyte nuclear protein 1
ENST00000341541 (THYN1-002) 134248279-134253344 protein_coding
ENST00000352327 (THYN1-001) 134248288-134253350 protein_coding
ENST00000392594 (THYN1-004) 134248279-134253370 protein_coding
ENST00000392595 (THYN1-005) 134248279-134253248 protein_coding
ENST00000525677 (THYN1-006) 134251231-134253301 processed_transcript
ENST00000531135 (THYN1-009) 134248882-134253353 retained_intron
ENST00000533781 (THYN1-008) 134249889-134251778 retained_intron
ENST00000533975 (THYN1-003) 134249039-134253348 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004R6_0001ENSDARG00000042658ENSDART00000062569ENSDART00000143632ENSDARG00000042659ENSDART00000062576CIL_0004R6_0002ENSG00000151498ENST00000281182ENST00000374752ENST00000524426ENST00000524502ENST00000524547ENST00000524739ENST00000525961ENST00000526026ENST00000527082ENST00000527665ENST00000527713ENST00000528325ENST00000530533ENST00000531338ENST00000533387ENST00000534240ENST00000534433ENSG00000151500ENST00000341541ENST00000352327ENST00000392594ENST00000392595ENST00000525677ENST00000531135ENST00000533781ENST00000533975
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004R6_0001ENSDARG00000042658ENSDART00000062569ENSDARG00000042659ENSDART00000062576CIL_0004R6_0002ENSG00000151498ENST00000281182ENST00000374752ENST00000524502ENST00000524547ENST00000526026ENST00000527665ENST00000527713ENST00000528325ENST00000530533ENST00000531338ENST00000533387ENSG00000151500ENST00000341541ENST00000352327ENST00000392594ENST00000392595ENST00000533975
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000042658 ENSDART00000062569 N/A N/A N/A 13.484±0.78 N/A N/A 22.686±1.36 10.904±1.74 1.201±0.00 N/A 4.222±0.00 N/A N/A N/A
ENSDART00000143632 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000042659 ENSDART00000062576 N/A N/A N/A 1.183±0.37 N/A N/A 1.297±0.61 6.149±0.00 0.188±0.00 N/A 0.405±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000151498 ENST00000281182 3.435±0.00 N/A 1.782±0.00 2.494±0.45 3.781±0.00 0.543±0.00 4.887±4.38 4.668±4.26 3.347±2.74 1.148±0.00 2.920±0.99 2.764±1.31 3.673±0.55 2.913±0.64
ENST00000374752 1.568±0.00 1.654±0.00 N/A N/A 4.143±0.00 0.975±0.00 1.691±0.00 5.197±0.00 1.456±0.70 N/A 1.799±0.00 2.256±0.23 N/A 2.893±0.00
ENST00000524426 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524502 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.908±0.00 N/A N/A N/A N/A
ENST00000524547 N/A N/A N/A N/A N/A N/A N/A N/A 1.962±0.00 N/A 4.406±0.00 N/A N/A N/A
ENST00000524739 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525961 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526026 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.857±0.00 N/A N/A N/A N/A
ENST00000527082 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527665 N/A N/A 1.053±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527713 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.951±0.00 9.714±0.00 16.135±0.00
ENST00000528325 N/A N/A N/A N/A N/A N/A N/A 1.241±0.00 N/A N/A N/A N/A N/A N/A
ENST00000530533 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.154±0.00 N/A N/A N/A N/A
ENST00000531338 N/A 1.371±0.00 N/A N/A N/A N/A N/A 0.301±0.00 N/A 0.737±0.00 N/A 0.805±0.00 N/A 1.115±0.17
ENST00000533387 1.064±0.00 1.910±0.00 N/A N/A N/A 0.574±0.10 N/A 1.756±0.00 0.844±0.00 0.801±0.00 1.377±0.00 1.875±0.32 0.468±0.00 2.025±0.00
ENST00000534240 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534433 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000151500 ENST00000341541 1.969±0.00 3.631±0.00 N/A 7.629±2.97 1.744±0.00 3.179±0.00 2.897±0.00 6.735±0.00 2.214±0.60 2.554±0.00 1.605±0.00 8.430±4.17 4.500±3.52 9.336±2.87
ENST00000352327 4.614±0.00 N/A N/A 6.642±1.01 3.410±0.10 2.378±0.00 N/A N/A N/A N/A N/A 7.186±4.26 2.861±1.45 7.239±1.23
ENST00000392594 7.189±0.00 15.605±0.00 1.762±0.00 11.882±0.00 8.966±4.70 10.042±7.24 4.955±2.11 5.605±1.61 6.793±3.99 5.875±4.75 6.296±0.00 9.451±0.00 2.652±0.68 17.925±7.98
ENST00000392595 10.183±0.00 N/A N/A 5.452±0.00 N/A N/A N/A 6.019±0.00 N/A 2.289±0.00 0.277±0.00 12.180±7.02 7.989±0.39 N/A
ENST00000525677 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531135 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533781 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533975 N/A N/A 0.822±0.00 N/A 1.572±0.00 2.709±1.08 0.778±0.00 N/A N/A 1.465±0.00 N/A 3.908±0.00 N/A 11.751±0.00

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