C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thymocyte nuclear protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000392594 THYN1-004 ENSG00000151500 9606 - 11:134248279-134253370 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000392594
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000392594 7.189±0.00 15.605±0.00 1.762±0.00 11.882±0.00 8.966±4.70 10.042±7.24 4.955±2.11 5.605±1.61 6.793±3.99 5.875±4.75 6.296±0.00 9.451±0.00 2.652±0.68 17.925±7.98

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005VG CIL_0005VG_0002 CGP 11:134224645-134253370
CIL_0004R6 CIL_0004R6_0002 CGP 11:134248279-134265855

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 ISS nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000039161 Thyn1-201 protein_coding Mus_musculus 0 671
ENSMUST00000034470 Vps26b-201 protein_coding Mus_musculus 1e-26 124

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