C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0004TA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000036159-ENSDARG00000036158 CGP 7955 19:23214202-23329742
GeneTranscriptPositionBiotype
ENSDARG00000036158 (nudcd1)
NudC domain containing 1
ENSDART00000052503 (nudcd1-001) 23245378-23329742 protein_coding
ENSDARG00000036159 (trhrb)
thyrotropin-releasing hormone receptor b
ENSDART00000052509 (trhrb-001) 23214202-23218074 protein_coding
CIL_0004TA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000174417-ENSG00000120526 CGP 9606 8:109086621-109334385
GeneTranscriptPositionBiotype
ENSG00000120526 (NUDCD1)
NudC domain containing 1
ENST00000239690 (NUDCD1-001) 109240919-109334385 protein_coding
ENST00000427660 (NUDCD1-003) 109242675-109329934 protein_coding
ENST00000519607 (NUDCD1-002) 109242675-109334118 nonsense_mediated_decay
ENST00000521439 (NUDCD1-004) 109275415-109329892 nonsense_mediated_decay
ENSG00000174417 (TRHR)
thyrotropin-releasing hormone receptor
ENST00000311762 (TRHR-001) 109087424-109119584 protein_coding
ENST00000518632 (TRHR-002) 109086621-109119567 protein_coding
ENSG00000250267 (RP11-122A21.2)
ENST00000504175 (RP11-122A21.2-001) 109298598-109316513 antisense
CIL_0004TA_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038760-ENSMUSG00000038736 CGP 10090 15:44196135-44428307
GeneTranscriptPositionBiotype
ENSMUSG00000022338 (Eny2)
enhancer of yellow 2 homolog (Drosophila)
ENSMUST00000060652 (Eny2-201) 44428111-44437685 protein_coding
ENSMUSG00000038736 (Nudcd1)
NudC domain containing 1
ENSMUST00000038719 (Nudcd1-201) 44375227-44428307 protein_coding
ENSMUSG00000038760 (Trhr)
thyrotropin releasing hormone receptor
ENSMUST00000038856 (Trhr-201) 44196135-44235912 protein_coding
ENSMUST00000110289 (Trhr-202) 44196233-44234163 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004TA_0001ENSDARG00000036158ENSDART00000052503ENSDARG00000036159ENSDART00000052509CIL_0004TA_0002ENSG00000120526ENST00000239690ENST00000427660ENST00000519607ENST00000521439ENSG00000174417ENST00000311762ENST00000518632ENSG00000250267ENST00000504175CIL_0004TA_0003ENSMUSG00000022338ENSMUST00000060652ENSMUSG00000038736ENSMUST00000038719ENSMUSG00000038760ENSMUST00000038856ENSMUST00000110289
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004TA_0001ENSDARG00000036158ENSDART00000052503ENSDARG00000036159ENSDART00000052509CIL_0004TA_0002ENSG00000120526ENST00000239690ENST00000427660ENST00000519607ENST00000521439ENSG00000174417ENST00000311762ENST00000518632ENSG00000250267ENST00000504175CIL_0004TA_0003ENSMUSG00000022338ENSMUST00000060652ENSMUSG00000038736ENSMUST00000038719ENSMUSG00000038760ENSMUST00000038856ENSMUST00000110289
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000036158 ENSDART00000052503 N/A N/A N/A 4.353±1.94 N/A N/A 3.977±0.89 16.376±3.00 0.606±0.00 N/A 1.487±0.00 N/A N/A N/A
ENSDARG00000036159 ENSDART00000052509 N/A N/A N/A 1.893±1.49 N/A N/A N/A N/A N/A N/A 0.158±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000120526 ENST00000239690 N/A N/A 0.931±0.00 1.629±0.18 2.107±0.00 1.575±0.00 0.447±0.00 1.240±0.23 1.577±0.00 2.323±0.08 N/A 2.701±1.03 1.983±0.08 2.383±0.00
ENST00000427660 N/A N/A N/A N/A 5.662±0.00 2.571±0.00 N/A N/A 2.145±0.00 N/A N/A 7.675±4.25 2.962±0.00 10.653±5.08
ENST00000519607 N/A N/A N/A N/A N/A 2.660±0.00 1.477±0.49 3.515±0.00 2.361±0.00 6.056±0.00 2.102±1.13 N/A N/A 4.346±0.00
ENST00000521439 N/A N/A 3.236±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000174417 ENST00000311762 0.008±0.00 N/A N/A 0.099±0.05 0.130±0.07 0.107±0.00 0.056±0.05 N/A N/A N/A 0.077±0.00 0.008±0.00 N/A N/A
ENST00000518632 N/A 0.053±0.00 N/A N/A N/A N/A N/A N/A 0.102±0.00 N/A N/A N/A N/A N/A
ENSG00000250267 ENST00000504175 0.019±0.00 0.044±0.00 0.065±0.00 0.083±0.05 0.109±0.10 N/A 0.031±0.00 0.049±0.00 0.046±0.04 0.015±0.00 N/A 0.032±0.01 0.033±0.01 0.011±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022338 ENSMUST00000060652 4.287±1.39 2.330±0.26 9.449±0.45 20.960±7.17 2.912±0.77 3.163±1.07 4.056±0.46 7.580±1.49 8.074±3.60 5.545±0.74 6.013±0.73 5.780±4.13 11.614±2.47 2.555±0.58
ENSMUSG00000038736 ENSMUST00000038719 2.515±0.94 1.335±0.21 2.154±0.24 3.403±0.05 1.908±0.28 2.794±1.02 0.811±0.19 1.694±0.21 3.824±2.02 2.242±0.26 1.589±0.34 3.773±1.19 4.417±3.69 7.455±1.53
ENSMUSG00000038760 ENSMUST00000038856 N/A N/A N/A 0.297±0.22 N/A N/A N/A 0.029±0.02 N/A N/A N/A N/A N/A 0.005±0.00
ENSMUST00000110289 0.060±0.03 N/A N/A N/A N/A 0.056±0.00 N/A 0.045±0.02 0.005±0.00 N/A N/A 0.018±0.00 N/A 0.016±0.01

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