C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NudC domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000038719 Nudcd1-201 ENSMUSG00000038736 10090 - 15:44375227-44428307 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000038719
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000038719 2.515±0.94 1.335±0.21 2.154±0.24 3.403±0.05 1.908±0.28 2.794±1.02 0.811±0.19 1.694±0.21 3.824±2.02 2.242±0.26 1.589±0.34 3.773±1.19 4.417±3.69 7.455±1.53

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004TA CIL_0004TA_0003 CGP 15:44196135-44428307
CIL_00060B CIL_00060B_0002 CGP 15:44375227-44437685

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000239690 NUDCD1-001 protein_coding Homo_sapiens 0 2641
ENST00000339942 ENY2-009 nonsense_mediated_decay Homo_sapiens 3e-25 119
ENST00000427660 NUDCD1-003 protein_coding Homo_sapiens 0 2178
ENST00000517311 ENY2-002 nonsense_mediated_decay Homo_sapiens 0 270
ENST00000517350 ENY2-004 retained_intron Homo_sapiens 0 283
ENST00000517756 ENY2-016 processed_transcript Homo_sapiens 0 198
ENST00000518584 ENY2-014 retained_intron Homo_sapiens 4.06377e-44 182
ENST00000519607 NUDCD1-002 nonsense_mediated_decay Homo_sapiens 0 1964
ENST00000519754 ENY2-013 retained_intron Homo_sapiens 2e-22 110
ENST00000520147 ENY2-012 protein_coding Homo_sapiens 1e-25 121
ENST00000521439 NUDCD1-004 nonsense_mediated_decay Homo_sapiens 0 961
ENST00000521662 ENY2-003 protein_coding Homo_sapiens 6e-33 145
ENST00000521688 ENY2-001 protein_coding Homo_sapiens 0 274
ENST00000522407 ENY2-010 processed_transcript Homo_sapiens 0 231
ENST00000522632 ENY2-011 retained_intron Homo_sapiens 0 233
ENST00000522766 ENY2-007 nonsense_mediated_decay Homo_sapiens 6e-33 145
ENST00000523335 ENY2-008 nonsense_mediated_decay Homo_sapiens 0 230

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