C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004TN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000106236-ENSG00000166448 CGP 9606 7:98617297-98870771
GeneTranscriptPositionBiotype
ENSG00000106236 (NPTX2)
neuronal pentraxin II 		ENST00000265634 (NPTX2-001) 98617297-98629868 protein_coding
ENST00000466102 (NPTX2-002) 98619667-98627253 retained_intron
ENSG00000166448 (TMEM130)
transmembrane protein 130 		ENST00000339375 (TMEM130-001) 98846488-98870036 protein_coding
ENST00000345589 (TMEM130-002) 98846857-98869957 protein_coding
ENST00000416379 (TMEM130-008) 98846488-98869866 protein_coding
ENST00000445790 (TMEM130-006) 98863095-98870771 protein_coding
ENST00000450876 (TMEM130-003) 98846501-98866946 protein_coding
ENST00000461092 (TMEM130-004) 98851525-98870014 processed_transcript
ENST00000474857 (TMEM130-007) 98846549-98847728 processed_transcript
ENST00000486839 (TMEM130-005) 98860188-98869294 processed_transcript
CIL_0004TN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000059991-ENSMUSG00000043388 CGP 10090 5:144545887-144761649
GeneTranscriptPositionBiotype
ENSMUSG00000043388 (Tmem130)
transmembrane protein 130 		ENSMUST00000061446 (Tmem130-001) 144735915-144761649 protein_coding
ENSMUSG00000059991 (Nptx2)
neuronal pentraxin 2 		ENSMUST00000071782 (Nptx2-201) 144545887-144557478 protein_coding
ENSMUSG00000082524 (Gm6272)
predicted pseudogene 6272 		ENSMUST00000121256 (Gm6272-001) 144723627-144723797 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004TN_0001ENSG00000106236ENST00000265634ENST00000466102ENSG00000166448ENST00000339375ENST00000345589ENST00000416379ENST00000445790ENST00000450876ENST00000461092ENST00000474857ENST00000486839CIL_0004TN_0002ENSMUSG00000043388ENSMUST00000061446ENSMUSG00000059991ENSMUST00000071782ENSMUSG00000082524ENSMUST00000121256
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004TN_0001ENSG00000106236ENST00000265634ENSG00000166448ENST00000339375ENST00000345589ENST00000416379ENST00000445790ENST00000450876ENST00000461092ENST00000474857ENST00000486839CIL_0004TN_0002ENSMUSG00000043388ENSMUST00000061446ENSMUSG00000059991ENSMUST00000071782ENSMUSG00000082524ENSMUST00000121256
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000106236 ENST00000265634 15.437±0.00 1.177±0.00 N/A 13.042±3.14 0.238±0.02 4.741±4.48 2.141±2.01 0.811±0.00 0.287±0.11 0.197±0.09 1.282±1.25 11.077±16.25 0.345±0.16 49.687±22.75
ENST00000466102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000166448 ENST00000339375 N/A N/A 0.048±0.00 18.743±7.26 N/A 0.312±0.00 0.205±0.00 N/A N/A 1.614±0.00 0.069±0.00 0.353±0.11 0.217±0.19 7.603±1.38
ENST00000345589 0.118±0.00 N/A N/A 10.096±0.00 N/A 0.402±0.08 N/A N/A 0.250±0.22 0.303±0.09 N/A 0.088±0.00 N/A N/A
ENST00000416379 N/A N/A N/A 15.455±6.74 0.061±0.00 0.978±0.00 0.064±0.00 1.304±0.00 N/A N/A N/A N/A 0.024±0.00 4.111±0.35
ENST00000445790 0.191±0.00 N/A N/A N/A 0.372±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450876 0.023±0.00 0.145±0.00 N/A N/A 0.029±0.00 N/A N/A N/A N/A N/A N/A 0.097±0.00 0.054±0.00 N/A
ENST00000461092 N/A N/A N/A N/A 0.323±0.00 N/A N/A N/A N/A N/A N/A 0.811±0.00 0.480±0.19 14.323±0.00
ENST00000474857 N/A 0.334±0.00 N/A N/A N/A 0.664±0.00 0.314±0.00 N/A N/A 1.047±0.00 N/A N/A 0.211±0.00 N/A
ENST00000486839 N/A N/A N/A N/A N/A 0.278±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000043388 ENSMUST00000061446 0.031±0.02 11.305±2.79 0.080±0.02 78.173±12.59 0.160±0.04 1.196±0.18 0.102±0.04 0.166±0.06 0.084±0.08 0.101±0.05 N/A 0.511±0.32 3.893±2.70 1.296±0.00
ENSMUSG00000059991 ENSMUST00000071782 4.586±3.38 0.176±0.08 7.097±0.68 10.485±6.47 0.670±0.18 1.049±0.17 0.090±0.07 0.114±0.03 0.018±0.01 0.676±0.03 0.036±0.02 3.229±1.58 0.762±0.25 4.681±1.81
ENSMUSG00000082524 ENSMUST00000121256 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.772±4.52

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