C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004V1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100341-ENSG00000100344 CGP 9606 22:43879678-43964488
GeneTranscriptPositionBiotype
ENSG00000100341 (PNPLA5)
patatin-like phospholipase domain containing 5 		ENST00000216177 (PNPLA5-201) 43879679-43892013 protein_coding
ENST00000381198 (PNPLA5-002) 43879876-43892013 protein_coding
ENST00000438734 (PNPLA5-003) 43884213-43891995 protein_coding
ENST00000593866 (PNPLA5-202) 43879679-43892013 protein_coding
ENST00000597664 (PNPLA5-001) 43879678-43892010 protein_coding
ENSG00000100344 (PNPLA3)
patatin-like phospholipase domain containing 3 		ENST00000216180 (PNPLA3-001) 43923739-43947568 protein_coding
ENST00000406117 (PNPLA3-005) 43923792-43964488 nonsense_mediated_decay
ENST00000423180 (PNPLA3-002) 43923803-43947061 protein_coding
ENST00000478713 (PNPLA3-003) 43924114-43933087 processed_transcript
ENST00000497129 (PNPLA3-004) 43933007-43939393 processed_transcript
ENSG00000100347 (SAMM50)
SAMM50 sorting and assembly machinery component 		ENST00000350028 (SAMM50-001) 43955421-43996533 protein_coding
ENST00000465768 (SAMM50-006) 43990328-44010531 processed_transcript
ENST00000474323 (SAMM50-002) 43974595-43996529 retained_intron
ENST00000493161 (SAMM50-004) 43955442-43973322 processed_transcript
ENST00000493621 (SAMM50-005) 43995391-43996376 processed_transcript
ENST00000494795 (SAMM50-003) 43986344-43996529 retained_intron
ENSG00000224856 (RP4-796I17.5)
 ENST00000430869 (RP4-796I17.5-001) 43957027-43957348 processed_pseudogene
CIL_0004V1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000018868-ENSMUSG00000041653 CGP 10090 15:84112621-84189512
GeneTranscriptPositionBiotype
ENSMUSG00000018868 (Pnpla5)
patatin-like phospholipase domain containing 5 		ENSMUST00000019012 (Pnpla5-201) 84112621-84123175 protein_coding
ENSMUSG00000041653 (Pnpla3)
patatin-like phospholipase domain containing 3 		ENSMUST00000045289 (Pnpla3-201) 84167816-84189512 protein_coding
ENSMUSG00000098882 (Mir6392)
microRNA 6392 		ENSMUST00000184924 (Mir6392-201) 84168270-84168377 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004V1_0001ENSG00000100341ENST00000216177ENST00000381198ENST00000438734ENST00000593866ENST00000597664ENSG00000100344ENST00000216180ENST00000406117ENST00000423180ENST00000478713ENST00000497129ENSG00000100347ENST00000350028ENST00000465768ENST00000474323ENST00000493161ENST00000493621ENST00000494795ENSG00000224856ENST00000430869CIL_0004V1_0002ENSMUSG00000018868ENSMUST00000019012ENSMUSG00000041653ENSMUST00000045289ENSMUSG00000098882ENSMUST00000184924
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004V1_0001ENSG00000100341ENST00000216177ENST00000381198ENST00000593866ENST00000597664ENSG00000100344ENST00000216180ENSG00000100347ENST00000350028ENST00000494795ENSG00000224856ENST00000430869CIL_0004V1_0002ENSMUSG00000018868ENSMUST00000019012ENSMUSG00000041653ENSMUST00000045289ENSMUSG00000098882ENSMUST00000184924
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100341 ENST00000216177 N/A N/A N/A 0.061±0.04 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000381198 N/A N/A N/A 0.108±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.030±0.00
ENST00000438734 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593866 0.011±0.00 0.071±0.00 N/A N/A 0.080±0.00 0.035±0.00 0.035±0.00 0.089±0.00 N/A 0.037±0.00 N/A N/A N/A N/A
ENST00000597664 N/A N/A N/A 0.050±0.03 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000100344 ENST00000216180 N/A N/A N/A N/A N/A N/A N/A 1.837±0.00 8.128±0.00 N/A N/A N/A N/A N/A
ENST00000406117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000423180 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478713 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497129 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000100347 ENST00000350028 49.819±0.00 26.449±0.00 6.735±0.00 16.758±7.36 28.650±25.08 16.485±5.91 17.879±11.24 15.180±8.89 12.638±5.86 7.021±2.04 31.697±12.77 24.047±9.51 17.847±1.01 28.397±4.04
ENST00000465768 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493161 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493621 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494795 N/A N/A N/A N/A 0.501±0.00 N/A N/A N/A N/A N/A N/A 1.077±0.00 N/A N/A
ENSG00000224856 ENST00000430869 0.097±0.00 0.249±0.00 N/A 0.052±0.00 N/A 0.234±0.00 N/A 0.050±0.00 N/A 0.092±0.00 0.087±0.00 N/A N/A 0.270±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018868 ENSMUST00000019012 0.156±0.01 0.055±0.02 0.022±0.01 N/A 0.442±0.34 N/A 0.038±0.01 0.037±0.01 0.036±0.02 0.273±0.02 0.059±0.02 0.183±0.13 0.010±0.00 0.024±0.01
ENSMUSG00000041653 ENSMUST00000045289 166.068±108.03 47.244±10.82 2.143±0.01 1.236±0.73 79.425±12.19 0.841±0.15 2.885±1.95 2.396±0.45 2.843±3.17 3.081±0.79 1.602±1.79 6.313±3.75 2.433±3.49 0.171±0.10
ENSMUSG00000098882 ENSMUST00000184924 7958.577±2575.91 2412.437±1014.91 N/A N/A 5902.120±2698.18 1610.020±0.00 2298.150±0.00 N/A 30.490±0.00 N/A N/A N/A N/A N/A

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