C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004XA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000111731-ENSG00000139163 CGP 9606 12:22448583-22690665
GeneTranscriptPositionBiotype
ENSG00000111731 (C2CD5)
C2 calcium-dependent domain containing 5 		ENST00000333957 (C2CD5-001) 22448583-22544546 protein_coding
ENST00000396028 (C2CD5-006) 22449545-22544409 protein_coding
ENST00000446597 (C2CD5-003) 22449545-22544409 protein_coding
ENST00000535304 (C2CD5-008) 22534707-22544189 retained_intron
ENST00000535555 (C2CD5-010) 22484795-22513324 protein_coding
ENST00000536386 (C2CD5-005) 22449545-22544409 protein_coding
ENST00000537643 (C2CD5-019) 22470897-22477338 processed_transcript
ENST00000539615 (C2CD5-016) 22449815-22472305 protein_coding
ENST00000540245 (C2CD5-013) 22470836-22472445 retained_intron
ENST00000540703 (C2CD5-015) 22518096-22525697 processed_transcript
ENST00000541310 (C2CD5-004) 22478028-22544546 retained_intron
ENST00000542676 (C2CD5-002) 22449581-22544253 protein_coding
ENST00000542683 (C2CD5-018) 22484755-22524480 nonsense_mediated_decay
ENST00000542768 (C2CD5-012) 22484338-22490182 retained_intron
ENST00000543797 (C2CD5-011) 22482562-22506967 retained_intron
ENST00000543855 (C2CD5-009) 22484743-22506819 processed_transcript
ENST00000543888 (C2CD5-014) 22456971-22458864 retained_intron
ENST00000545552 (C2CD5-007) 22449656-22544492 protein_coding
ENSG00000139163 (ETNK1)
ethanolamine kinase 1 		ENST00000266517 (ETNK1-001) 22625075-22690665 protein_coding
ENST00000335148 (ETNK1-002) 22625141-22644587 protein_coding
ENST00000538218 (ETNK1-006) 22625192-22685223 protein_coding
ENST00000539974 (ETNK1-004) 22643889-22661228 retained_intron
ENST00000544191 (ETNK1-003) 22671086-22684551 retained_intron
ENST00000545979 (ETNK1-005) 22625357-22626200 protein_coding
ENSG00000250166 (RP11-268P4.5)
 ENST00000508615 (RP11-268P4.5-001) 22601425-22618867 lincRNA
ENSG00000256371 (LRRC34P1)
leucine rich repeat containing 34 pseudogene 1 		ENST00000542742 (LRRC34P1-001) 22573425-22575105 processed_pseudogene
ENSG00000256973 (RP11-359J14.2)
 ENST00000543604 (RP11-359J14.2-001) 22460519-22463914 lincRNA
ENSG00000257023 (RP11-268P4.4)
 ENST00000542076 (RP11-268P4.4-001) 22609228-22625015 antisense
ENSG00000274885 (RP11-268P4.6)
 ENST00000612441 (RP11-268P4.6-001) 22638464-22638943 sense_intronic
CIL_0004XA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030279-ENSMUSG00000030275 CGP 10090 6:143010920-143208542
GeneTranscriptPositionBiotype
ENSMUSG00000030275 (Etnk1)
ethanolamine kinase 1 		ENSMUST00000032413 (Etnk1-201) 143167230-143208542 protein_coding
ENSMUSG00000030279 (C2cd5)
C2 calcium-dependent domain containing 5 		ENSMUST00000087485 (C2cd5-201) 143010920-143100107 protein_coding
ENSMUST00000111758 (C2cd5-202) 143010920-143100107 protein_coding
ENSMUST00000171349 (C2cd5-203) 143010920-143100107 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004XA_0001ENSG00000111731ENST00000333957ENST00000396028ENST00000446597ENST00000535304ENST00000535555ENST00000536386ENST00000537643ENST00000539615ENST00000540245ENST00000540703ENST00000541310ENST00000542676ENST00000542683ENST00000542768ENST00000543797ENST00000543855ENST00000543888ENST00000545552ENSG00000139163ENST00000266517ENST00000335148ENST00000538218ENST00000539974ENST00000544191ENST00000545979ENSG00000250166ENST00000508615ENSG00000256371ENST00000542742ENSG00000256973ENST00000543604ENSG00000257023ENST00000542076ENSG00000274885ENST00000612441CIL_0004XA_0002ENSMUSG00000030275ENSMUST00000032413ENSMUSG00000030279ENSMUST00000087485ENSMUST00000111758ENSMUST00000171349
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004XA_0001ENSG00000111731ENST00000333957ENST00000396028ENST00000446597ENST00000540703ENST00000542676ENST00000542683ENST00000545552ENSG00000139163ENST00000266517ENST00000335148ENST00000538218ENSG00000250166ENST00000508615ENSG00000256371ENST00000542742ENSG00000256973ENST00000543604ENSG00000257023ENST00000542076ENSG00000274885ENST00000612441CIL_0004XA_0002ENSMUSG00000030275ENSMUST00000032413ENSMUSG00000030279ENSMUST00000087485ENSMUST00000111758ENSMUST00000171349
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000111731 ENST00000333957 1.532±0.00 1.684±0.00 2.162±0.00 6.629±0.00 3.596±2.06 2.920±0.29 0.602±0.36 3.761±0.00 0.449±0.00 1.044±0.14 N/A 2.508±0.33 2.070±0.88 2.467±0.78
ENST00000396028 N/A N/A N/A N/A N/A 1.577±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446597 N/A N/A N/A N/A N/A 1.272±0.00 N/A N/A 3.990±0.00 1.302±0.00 0.139±0.00 N/A N/A N/A
ENST00000535304 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535555 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536386 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537643 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539615 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540245 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540703 N/A N/A 9.304±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541310 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542676 N/A N/A 2.315±0.00 N/A N/A N/A 0.619±0.00 0.753±0.00 N/A N/A N/A 2.306±0.21 N/A N/A
ENST00000542683 N/A N/A 5.078±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542768 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543797 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543855 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543888 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545552 N/A N/A N/A 2.773±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000139163 ENST00000266517 2.361±0.00 1.968±0.00 2.609±0.00 7.760±0.58 2.585±0.52 4.450±0.72 1.636±0.55 7.129±0.00 3.201±1.23 7.470±0.24 0.576±0.43 3.699±0.89 1.587±0.21 4.526±0.07
ENST00000335148 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.862±0.00 N/A 2.748±0.00 19.225±0.00
ENST00000538218 N/A N/A N/A N/A N/A N/A N/A 2.678±0.00 N/A N/A N/A N/A N/A 7.233±0.00
ENST00000539974 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545979 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000250166 ENST00000508615 0.164±0.00 0.731±0.00 N/A 1.713±1.10 0.398±0.00 0.031±0.00 0.062±0.00 N/A N/A 0.265±0.00 0.262±0.00 N/A N/A 0.398±0.08
ENSG00000256371 ENST00000542742 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.023±0.00
ENSG00000256973 ENST00000543604 0.131±0.00 0.152±0.00 3.197±0.00 0.638±0.06 0.998±0.82 1.659±0.00 0.274±0.04 1.339±1.07 0.082±0.00 0.445±0.40 0.012±0.00 0.411±0.19 N/A 0.185±0.03
ENSG00000257023 ENST00000542076 N/A 0.109±0.00 N/A 0.099±0.00 0.162±0.00 N/A 0.069±0.00 N/A N/A 0.072±0.00 N/A 0.063±0.04 N/A 0.138±0.00
ENSG00000274885 ENST00000612441 0.041±0.00 0.163±0.00 1.097±0.00 N/A 0.227±0.00 4.284±0.00 0.210±0.17 0.320±0.15 0.015±0.00 0.039±0.00 0.016±0.00 0.480±0.56 N/A 0.034±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030275 ENSMUST00000032413 18.692±4.89 53.565±9.46 14.819±4.23 27.759±7.86 19.971±10.32 22.202±3.62 7.939±0.39 50.145±6.01 9.368±3.07 29.727±1.69 3.763±0.78 41.775±19.14 7.630±3.05 24.483±9.79
ENSMUSG00000030279 ENSMUST00000087485 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.266±0.00 N/A N/A 0.383±0.00
ENSMUST00000111758 0.643±0.29 0.681±0.03 1.402±0.01 N/A 0.696±0.12 1.520±0.58 N/A 1.347±0.26 1.570±1.78 0.780±0.17 0.435±0.19 1.274±0.41 0.942±0.33 0.863±0.22
ENSMUST00000171349 1.697±0.40 0.962±0.61 1.069±0.00 9.297±3.24 1.774±0.64 2.310±0.78 1.657±0.20 2.750±0.85 2.745±2.31 1.924±0.83 0.868±0.29 1.986±1.15 1.455±0.38 1.302±0.28

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