C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: C2 calcium-dependent domain containing 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000171349 C2cd5-203 ENSMUSG00000030279 10090 - 6:143010920-143100107 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000171349
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000171349 1.697±0.40 0.962±0.61 1.069±0.00 9.297±3.24 1.774±0.64 2.310±0.78 1.657±0.20 2.750±0.85 2.745±2.31 1.924±0.83 0.868±0.29 1.986±1.15 1.455±0.38 1.302±0.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005PQ CIL_0005PQ_0002 CGP 6:142821545-143100107
CIL_0008XD CIL_0008XD_0002 VISTA 6:142997273-143598460
CIL_0004XA CIL_0004XA_0002 CGP 6:143010920-143208542

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IDA calcium ion binding
GO:0005886 IDA plasma membrane
GO:0006906 IMP vesicle fusion
GO:0072659 IGI protein localization to plasma membrane
GO:2001275 IGI positive regulation of glucose import in response to insulin stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000113269 C2CD5 (1 of 2)-202 protein_coding Danio_rerio 0 579
ENSDART00000142809 C2CD5 (1 of 2)-002 protein_coding Danio_rerio 0 579
ENSDART00000114507 C2CD5 (1 of 2)-201 protein_coding Danio_rerio 0 241
ENSDART00000141468 C2CD5 (1 of 2)-001 protein_coding Danio_rerio 0 241
ENST00000333957 C2CD5-001 protein_coding Homo_sapiens 0 3520
ENST00000396028 C2CD5-006 protein_coding Homo_sapiens 0 1725
ENST00000446597 C2CD5-003 protein_coding Homo_sapiens 0 3016
ENST00000535304 C2CD5-008 retained_intron Homo_sapiens 0 267
ENST00000535555 C2CD5-010 protein_coding Homo_sapiens 0 366
ENST00000536386 C2CD5-005 protein_coding Homo_sapiens 0 1616
ENST00000537643 C2CD5-019 processed_transcript Homo_sapiens 0 516
ENST00000540245 C2CD5-013 retained_intron Homo_sapiens 0 372
ENST00000540703 C2CD5-015 processed_transcript Homo_sapiens 0 521
ENST00000541310 C2CD5-004 retained_intron Homo_sapiens 0 1042
ENST00000542676 C2CD5-002 protein_coding Homo_sapiens 0 2985
ENST00000542683 C2CD5-018 nonsense_mediated_decay Homo_sapiens 0 621
ENST00000542768 C2CD5-012 retained_intron Homo_sapiens 0 259
ENST00000543797 C2CD5-011 retained_intron Homo_sapiens 0 789
ENST00000543855 C2CD5-009 processed_transcript Homo_sapiens 0 255
ENST00000545552 C2CD5-007 protein_coding Homo_sapiens 0 1531

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