C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protogenin homolog (Gallus gallus)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000055535 Prtg-001 ENSMUSG00000036030 10090 + 9:72806874-72917291 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000055535
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000055535 0.316±0.19 0.042±0.01 0.072±0.01 0.233±0.07 0.274±0.10 0.030±0.01 0.029±0.01 0.043±0.01 0.040±0.04 0.032±0.01 0.037±0.01 0.188±0.08 0.766±0.40 0.058±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004U3 CIL_0004U3_0002 CGP 9:72662346-72917291
CIL_0004YO CIL_0004YO_0002 CGP 9:72806874-72952181

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005615 IEA extracellular space
GO:0007275 IEA multicellular organismal development
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000389286 PRTG-001 protein_coding Homo_sapiens 0 3618
ENST00000558349 PRTG-005 protein_coding Homo_sapiens 0 287
ENST00000561292 PRTG-004 protein_coding Homo_sapiens 0 416

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