C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00050R_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000042485-ENSDARG00000060745 CGP 7955 8:31300987-31342659
GeneTranscriptPositionBiotype
ENSDARG00000042485 (foxd5)
forkhead box D5 		ENSDART00000062303 (foxd5-001) 31300987-31302138 protein_coding
ENSDARG00000060745 (pgm5)
phosphoglucomutase 5 		ENSDART00000085894 (pgm5-001) 31304203-31342659 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_00050R_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000187559-ENSG00000154330 CGP 9606 9:68302867-68531061
GeneTranscriptPositionBiotype
ENSG00000187559 (FOXD4L3)
forkhead box D4-like 3 		ENST00000342833 (FOXD4L3-001) 68302867-68304905 protein_coding
ENSG00000224958 (PGM5-AS1)
PGM5 antisense RNA 1 		ENST00000417887 (PGM5-AS1-001) 68355189-68357852 antisense
ENST00000420855 (PGM5-AS1-002) 68355189-68357820 antisense
ENSG00000225337 (RP11-561O23.7)
 ENST00000419576 (RP11-561O23.7-001) 68307393-68308445 lincRNA
ENSG00000229019 (RP11-88I18.3)
 ENST00000434656 (RP11-88I18.3-001) 68426843-68429369 sense_intronic

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00050R_0001ENSDARG00000042485ENSDART00000062303ENSDARG00000060745ENSDART00000085894CIL_00050R_0002ENSG00000187559ENST00000342833ENSG00000224958ENST00000417887ENST00000420855ENSG00000225337ENST00000419576ENSG00000229019ENST00000434656
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00050R_0001ENSDARG00000042485ENSDART00000062303ENSDARG00000060745ENSDART00000085894CIL_00050R_0002ENSG00000187559ENST00000342833ENSG00000224958ENST00000417887ENST00000420855ENSG00000225337ENST00000419576ENSG00000229019ENST00000434656
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000042485 ENSDART00000062303 N/A N/A N/A 0.548±0.51 N/A N/A 0.057±0.00 0.198±0.00 0.038±0.00 N/A 0.113±0.00 N/A N/A N/A
ENSDARG00000060745 ENSDART00000085894 N/A N/A N/A 0.229±0.12 N/A N/A 1.537±0.00 0.541±0.00 N/A N/A 1.190±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000187559 ENST00000342833 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.041±0.00 N/A
ENSG00000224958 ENST00000417887 1.364±0.00 0.269±0.00 N/A 0.056±0.00 0.361±0.00 36.229±0.00 0.043±0.00 0.216±0.00 14.827±0.00 N/A 0.317±0.00 0.423±0.28 0.209±0.00 5.221±5.10
ENST00000420855 0.405±0.00 0.690±0.00 N/A 0.055±0.00 0.590±0.00 2.608±1.88 0.041±0.00 N/A N/A 0.251±0.00 N/A 0.349±0.00 0.049±0.00 2.337±0.00
ENSG00000225337 ENST00000419576 N/A N/A N/A 0.078±0.00 N/A N/A N/A N/A N/A N/A N/A 0.342±0.00 N/A 0.659±0.56
ENSG00000229019 ENST00000434656 0.023±0.00 0.155±0.00 0.481±0.00 0.268±0.00 1.875±1.76 0.970±0.85 1.307±0.72 N/A 8.585±0.00 1.087±0.00 0.742±0.00 0.435±0.61 N/A 0.131±0.00

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