C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: forkhead box D4-like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000342833 FOXD4L3-001 ENSG00000187559 9606 + 9:68302867-68304905 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENST00000342833
Transcript ID Placenta
ENST00000342833 0.041±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00038H CIL_00038H_0004 CGP 9:68232003-68304905
CIL_00050R CIL_00050R_0002 CGP 9:68302867-68531061

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000058600 Foxd4-201 protein_coding Mus_musculus 0 590
ENSMUST00000087285 Foxd3-001 protein_coding Mus_musculus 0 331
ENSMUST00000105098 Foxd1-001 protein_coding Mus_musculus 0 309
ENSMUST00000068654 Foxd2-001 protein_coding Mus_musculus 0 292
ENSDART00000077753 foxc1b-001 protein_coding Danio_rerio 0.0001 53

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