C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00051V_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000030872-ENSDARG00000024631 CGP 7955 18:17270795-17316969
GeneTranscriptPositionBiotype
ENSDARG00000024631 (NLRC5)
NLR family, CARD domain containing 5 		ENSDART00000033762 (NLRC5-201) 17284594-17316964 protein_coding
ENSDART00000151865 (NLRC5-001) 17283463-17316969 protein_coding
ENSDARG00000030872 (cetp)
cholesteryl ester transfer protein, plasma 		ENSDART00000046891 (cetp-001) 17270795-17280994 protein_coding
CIL_00051V_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000087237-ENSG00000140853 CGP 9606 16:56961850-57083531
GeneTranscriptPositionBiotype
ENSG00000087237 (CETP)
cholesteryl ester transfer protein, plasma 		ENST00000200676 (CETP-001) 56961850-56983845 protein_coding
ENST00000379780 (CETP-002) 56961923-56983844 protein_coding
ENST00000566128 (CETP-003) 56962107-56983845 protein_coding
ENST00000569082 (CETP-004) 56961982-56973368 processed_transcript
ENSG00000140853 (NLRC5)
NLR family, CARD domain containing 5 		ENST00000262510 (NLRC5-001) 56989498-57083524 protein_coding
ENST00000399221 (NLRC5-026) 57058065-57062003 protein_coding
ENST00000436936 (NLRC5-201) 57017074-57083524 protein_coding
ENST00000534927 (NLRC5-029) 57075925-57082597 retained_intron
ENST00000534931 (NLRC5-023) 57045297-57055036 retained_intron
ENST00000535284 (NLRC5-024) 57059183-57062004 retained_intron
ENST00000535658 (NLRC5-017) 56989594-56991126 processed_transcript
ENST00000536231 (NLRC5-020) 57026639-57030084 retained_intron
ENST00000537056 (NLRC5-012) 57043581-57083524 nonsense_mediated_decay
ENST00000538059 (NLRC5-016) 57004486-57020769 protein_coding
ENST00000538110 (NLRC5-006) 57026423-57061933 protein_coding
ENST00000538273 (NLRC5-019) 56989563-57021112 retained_intron
ENST00000538453 (NLRC5-009) 57034172-57083531 nonsense_mediated_decay
ENST00000538778 (NLRC5-021) 57041408-57061519 retained_intron
ENST00000538805 (NLRC5-004) 57025687-57062003 protein_coding
ENST00000538930 (NLRC5-011) 57041321-57062744 retained_intron
ENST00000539144 (NLRC5-013) 57020713-57083519 protein_coding
ENST00000539881 (NLRC5-003) 56989485-57048354 nonsense_mediated_decay
ENST00000540182 (NLRC5-010) 57040688-57083524 nonsense_mediated_decay
ENST00000541020 (NLRC5-022) 57041488-57043808 retained_intron
ENST00000543030 (NLRC5-008) 57026879-57061966 protein_coding
ENST00000543049 (NLRC5-030) 57080999-57082633 retained_intron
ENST00000543103 (NLRC5-014) 57080819-57083520 retained_intron
ENST00000543141 (NLRC5-018) 56989563-56992444 processed_transcript
ENST00000543402 (NLRC5-025) 57059200-57061933 retained_intron
ENST00000544189 (NLRC5-027) 57074171-57076851 retained_intron
ENST00000544641 (NLRC5-015) 57003853-57020936 protein_coding
ENST00000545081 (NLRC5-007) 57025762-57083519 nonsense_mediated_decay
ENST00000545349 (NLRC5-028) 57069877-57077369 nonsense_mediated_decay
ENSG00000259922 (RP11-322D14.1)
 ENST00000566704 (RP11-322D14.1-001) 57013071-57014100 processed_pseudogene
ENSG00000260145 (RP11-322D14.2)
 ENST00000562970 (RP11-322D14.2-001) 57052505-57058497 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00051V_0001ENSDARG00000024631ENSDART00000033762ENSDART00000151865ENSDARG00000030872ENSDART00000046891CIL_00051V_0002ENSG00000087237ENST00000200676ENST00000379780ENST00000566128ENST00000569082ENSG00000140853ENST00000262510ENST00000399221ENST00000436936ENST00000534927ENST00000534931ENST00000535284ENST00000535658ENST00000536231ENST00000537056ENST00000538059ENST00000538110ENST00000538273ENST00000538453ENST00000538778ENST00000538805ENST00000538930ENST00000539144ENST00000539881ENST00000540182ENST00000541020ENST00000543030ENST00000543049ENST00000543103ENST00000543141ENST00000543402ENST00000544189ENST00000544641ENST00000545081ENST00000545349ENSG00000259922ENST00000566704ENSG00000260145ENST00000562970
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00051V_0001ENSDARG00000024631ENSDART00000033762ENSDART00000151865ENSDARG00000030872ENSDART00000046891CIL_00051V_0002ENSG00000087237ENST00000200676ENST00000379780ENST00000569082ENSG00000140853ENST00000262510ENST00000399221ENST00000436936ENST00000534927ENST00000536231ENST00000537056ENST00000538273ENST00000538453ENST00000538778ENST00000538805ENST00000539144ENST00000539881ENST00000543030ENST00000543103ENST00000543141ENST00000545081ENST00000545349ENSG00000259922ENST00000566704ENSG00000260145ENST00000562970
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000024631 ENSDART00000033762 N/A N/A N/A 0.573±0.22 N/A N/A 1.930±1.03 1.450±0.71 0.076±0.00 N/A 0.465±0.00 N/A N/A N/A
ENSDART00000151865 N/A N/A N/A 0.198±0.00 N/A N/A 1.424±0.21 0.469±0.00 0.225±0.00 N/A 0.687±0.00 N/A N/A N/A
ENSDARG00000030872 ENSDART00000046891 N/A N/A N/A 0.423±0.23 N/A N/A 0.627±0.21 21.971±0.00 7.484±0.00 N/A 0.485±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000087237 ENST00000200676 9.709±0.00 12.393±0.00 N/A 0.195±0.00 3.411±0.00 1.419±0.00 0.589±0.00 3.700±1.40 6.098±0.00 1.262±0.80 N/A 0.345±0.15 10.092±5.62 0.253±0.00
ENST00000379780 N/A 7.133±0.00 0.472±0.00 0.277±0.00 0.756±0.00 0.284±0.00 N/A N/A 0.578±0.39 0.541±0.00 N/A 0.143±0.00 4.000±0.72 0.177±0.00
ENST00000566128 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569082 N/A N/A 0.281±0.00 0.135±0.00 N/A 0.077±0.00 0.277±0.00 N/A N/A N/A 0.182±0.00 N/A N/A N/A
ENSG00000140853 ENST00000262510 N/A N/A N/A 0.194±0.00 1.470±0.88 0.520±0.00 N/A N/A N/A 1.861±0.98 N/A 3.233±0.28 N/A N/A
ENST00000399221 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.660±0.00 N/A
ENST00000436936 1.477±0.00 N/A N/A 0.035±0.00 N/A N/A N/A 0.538±0.00 N/A 3.973±0.00 N/A 1.954±0.00 0.387±0.08 N/A
ENST00000534927 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.338±0.00 N/A N/A N/A N/A
ENST00000534931 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535284 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536231 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.582±0.00 N/A N/A N/A
ENST00000537056 N/A 7.665±0.00 N/A N/A 1.152±0.00 N/A N/A 0.884±0.08 0.951±0.00 N/A N/A 2.193±0.00 0.847±0.00 N/A
ENST00000538059 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538110 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538273 N/A N/A N/A 0.412±0.00 N/A N/A N/A 2.417±0.00 N/A N/A N/A N/A N/A N/A
ENST00000538453 N/A N/A N/A N/A N/A N/A N/A 0.534±0.00 N/A N/A N/A N/A N/A N/A
ENST00000538778 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.487±0.00 N/A N/A N/A
ENST00000538805 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.107±0.00 N/A 0.306±0.00 N/A
ENST00000538930 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539144 1.991±0.00 7.157±0.00 N/A 0.508±0.00 0.922±0.00 0.319±0.00 1.024±0.00 0.697±0.00 N/A 5.044±0.00 N/A 1.085±0.00 0.212±0.00 0.513±0.00
ENST00000539881 N/A N/A 0.141±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540182 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541020 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543030 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.241±0.00 N/A N/A N/A
ENST00000543049 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543103 N/A 11.480±0.00 N/A 0.195±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543141 N/A N/A N/A N/A 5.687±0.00 N/A N/A N/A N/A 5.409±0.00 1.106±0.33 N/A N/A N/A
ENST00000543402 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544641 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545081 N/A N/A N/A N/A N/A 1.458±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545349 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.747±0.00 N/A N/A N/A
ENSG00000259922 ENST00000566704 0.028±0.00 0.162±0.00 N/A 0.009±0.00 N/A 0.500±0.00 0.017±0.00 N/A N/A N/A N/A 0.082±0.04 N/A 0.057±0.00
ENSG00000260145 ENST00000562970 N/A 0.497±0.00 N/A 0.030±0.00 N/A 0.404±0.00 0.025±0.00 N/A N/A 0.556±0.34 N/A 0.070±0.03 N/A 0.093±0.01

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