C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00052E_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000020602-ENSDARG00000015790 CGP 7955 2:16357036-16386273
GeneTranscriptPositionBiotype
ENSDARG00000015790 (atp1b3a)
ATPase, Na+/K+ transporting, beta 3a polypeptide 		ENSDART00000022549 (atp1b3a-001) 16368289-16386273 protein_coding
ENSDART00000100282 (atp1b3a-201) 16368312-16386042 protein_coding
ENSDART00000147830 (atp1b3a-002) 16369455-16375059 retained_intron
ENSDART00000156406 (atp1b3a-003) 16368939-16383088 protein_coding
ENSDARG00000020602 (grk7a)
G-protein-coupled receptor kinase 7a 		ENSDART00000100287 (grk7a-001) 16357036-16364926 protein_coding

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_00052E_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000114124-ENSG00000069849 CGP 9606 3:141778148-141926514
GeneTranscriptPositionBiotype
ENSG00000069849 (ATP1B3)
ATPase, Na+/K+ transporting, beta 3 polypeptide 		ENST00000286371 (ATP1B3-001) 141876614-141926484 protein_coding
ENST00000462082 (ATP1B3-007) 141876855-141926182 protein_coding
ENST00000465172 (ATP1B3-002) 141876616-141926514 nonsense_mediated_decay
ENST00000466678 (ATP1B3-003) 141876806-141926481 nonsense_mediated_decay
ENST00000475483 (ATP1B3-004) 141876124-141916010 protein_coding
ENST00000482635 (ATP1B3-009) 141903728-141922180 retained_intron
ENST00000484727 (ATP1B3-011) 141921534-141925985 processed_transcript
ENST00000486782 (ATP1B3-012) 141921948-141925643 retained_intron
ENST00000487199 (ATP1B3-010) 141915970-141925728 nonsense_mediated_decay
ENST00000495216 (ATP1B3-008) 141877529-141913706 protein_coding
ENSG00000114124 (GRK7)
G protein-coupled receptor kinase 7 		ENST00000264952 (GRK7-001) 141778148-141818490 protein_coding
ENSG00000228398 (HMGN2P25)
high mobility group nucleosomal binding domain 2 pseudogene 25 		ENST00000486956 (HMGN2P25-001) 141865012-141865279 processed_pseudogene
ENSG00000244124 (ATP1B3-AS1)
ATP1B3 antisense RNA 1 		ENST00000492725 (ATP1B3-AS1-001) 141918252-141919021 antisense

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00052E_0001ENSDARG00000015790ENSDART00000022549ENSDART00000100282ENSDART00000147830ENSDART00000156406ENSDARG00000020602ENSDART00000100287CIL_00052E_0002ENSG00000069849ENST00000286371ENST00000462082ENST00000465172ENST00000466678ENST00000475483ENST00000482635ENST00000484727ENST00000486782ENST00000487199ENST00000495216ENSG00000114124ENST00000264952ENSG00000228398ENST00000486956ENSG00000244124ENST00000492725
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00052E_0001ENSDARG00000015790ENSDART00000022549ENSDART00000100282ENSDART00000156406ENSDARG00000020602ENSDART00000100287CIL_00052E_0002ENSG00000069849ENST00000286371ENST00000462082ENST00000466678ENST00000475483ENST00000482635ENST00000484727ENST00000486782ENST00000487199ENST00000495216ENSG00000114124ENST00000264952ENSG00000228398ENST00000486956ENSG00000244124ENST00000492725
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000015790 ENSDART00000022549 N/A N/A N/A 13.804±6.73 N/A N/A 0.407±0.00 0.481±0.24 N/A N/A 1.515±0.00 N/A N/A N/A
ENSDART00000100282 N/A N/A N/A 16.840±9.65 N/A N/A 0.156±0.11 0.386±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000147830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000156406 N/A N/A N/A N/A N/A N/A N/A 0.476±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000020602 ENSDART00000100287 N/A N/A N/A 0.236±0.17 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000069849 ENST00000286371 7.470±0.00 8.511±0.00 2.334±0.00 7.307±2.65 4.694±1.46 5.629±0.34 4.640±4.02 21.918±0.00 2.279±0.36 18.546±16.11 N/A 21.602±2.55 16.309±6.80 15.487±1.69
ENST00000462082 16.977±0.00 39.514±0.00 8.174±0.00 21.001±10.08 23.867±0.00 13.145±3.79 10.956±9.26 60.176±0.00 5.783±0.00 31.560±29.39 4.771±0.00 25.971±10.05 48.588±9.74 53.811±0.00
ENST00000465172 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466678 N/A N/A N/A N/A N/A N/A N/A 0.365±0.00 N/A N/A 0.758±0.00 N/A N/A N/A
ENST00000475483 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.932±0.00 N/A N/A N/A
ENST00000482635 N/A 15.703±0.00 N/A N/A 13.083±0.00 N/A N/A N/A N/A N/A N/A 22.698±0.00 19.865±0.00 23.703±4.56
ENST00000484727 N/A 16.002±0.00 N/A N/A 8.206±0.00 N/A N/A N/A N/A N/A 1.307±0.00 N/A N/A N/A
ENST00000486782 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.696±0.00 N/A N/A N/A
ENST00000487199 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.404±0.00 N/A N/A N/A
ENST00000495216 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.574±0.00 N/A N/A N/A
ENSG00000114124 ENST00000264952 0.060±0.00 0.192±0.00 N/A 0.023±0.00 0.038±0.00 0.008±0.00 0.008±0.00 N/A 0.069±0.04 0.007±0.00 0.090±0.00 0.030±0.01 0.018±0.01 0.132±0.07
ENSG00000228398 ENST00000486956 N/A N/A N/A N/A 0.078±0.00 0.214±0.00 0.073±0.00 0.078±0.00 N/A 0.081±0.00 0.211±0.00 N/A N/A N/A
ENSG00000244124 ENST00000492725 N/A N/A N/A 2.321±0.00 0.213±0.00 0.101±0.00 N/A 0.349±0.00 1.247±0.00 0.284±0.09 N/A 6.852±9.53 0.101±0.00 0.226±0.07

Loading