C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00052E_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000020602-ENSDARG00000015790 CGP 7955 2:16357036-16386273
GeneTranscriptPositionBiotype
ENSDARG00000015790 (atp1b3a)
ATPase, Na+/K+ transporting, beta 3a polypeptide 		ENSDART00000022549 (atp1b3a-001) 16368289-16386273 protein_coding
ENSDART00000100282 (atp1b3a-201) 16368312-16386042 protein_coding
ENSDART00000147830 (atp1b3a-002) 16369455-16375059 retained_intron
ENSDART00000156406 (atp1b3a-003) 16368939-16383088 protein_coding
ENSDARG00000020602 (grk7a)
G-protein-coupled receptor kinase 7a 		ENSDART00000100287 (grk7a-001) 16357036-16364926 protein_coding
CIL_00052E_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000114124-ENSG00000069849 CGP 9606 3:141778148-141926514
GeneTranscriptPositionBiotype
ENSG00000069849 (ATP1B3)
ATPase, Na+/K+ transporting, beta 3 polypeptide 		ENST00000286371 (ATP1B3-001) 141876614-141926484 protein_coding
ENST00000462082 (ATP1B3-007) 141876855-141926182 protein_coding
ENST00000465172 (ATP1B3-002) 141876616-141926514 nonsense_mediated_decay
ENST00000466678 (ATP1B3-003) 141876806-141926481 nonsense_mediated_decay
ENST00000475483 (ATP1B3-004) 141876124-141916010 protein_coding
ENST00000482635 (ATP1B3-009) 141903728-141922180 retained_intron
ENST00000484727 (ATP1B3-011) 141921534-141925985 processed_transcript
ENST00000486782 (ATP1B3-012) 141921948-141925643 retained_intron
ENST00000487199 (ATP1B3-010) 141915970-141925728 nonsense_mediated_decay
ENST00000495216 (ATP1B3-008) 141877529-141913706 protein_coding
ENSG00000114124 (GRK7)
G protein-coupled receptor kinase 7 		ENST00000264952 (GRK7-001) 141778148-141818490 protein_coding
ENSG00000228398 (HMGN2P25)
high mobility group nucleosomal binding domain 2 pseudogene 25 		ENST00000486956 (HMGN2P25-001) 141865012-141865279 processed_pseudogene
ENSG00000244124 (ATP1B3-AS1)
ATP1B3 antisense RNA 1 		ENST00000492725 (ATP1B3-AS1-001) 141918252-141919021 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00052E_0001ENSDARG00000015790ENSDART00000022549ENSDART00000100282ENSDART00000147830ENSDART00000156406ENSDARG00000020602ENSDART00000100287CIL_00052E_0002ENSG00000069849ENST00000286371ENST00000462082ENST00000465172ENST00000466678ENST00000475483ENST00000482635ENST00000484727ENST00000486782ENST00000487199ENST00000495216ENSG00000114124ENST00000264952ENSG00000228398ENST00000486956ENSG00000244124ENST00000492725
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00052E_0001ENSDARG00000015790ENSDART00000022549ENSDART00000100282ENSDART00000156406ENSDARG00000020602ENSDART00000100287CIL_00052E_0002ENSG00000069849ENST00000286371ENST00000462082ENST00000466678ENST00000475483ENST00000482635ENST00000484727ENST00000486782ENST00000487199ENST00000495216ENSG00000114124ENST00000264952ENSG00000228398ENST00000486956ENSG00000244124ENST00000492725
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000015790 ENSDART00000022549 N/A N/A N/A 13.804±6.73 N/A N/A 0.407±0.00 0.481±0.24 N/A N/A 1.515±0.00 N/A N/A N/A
ENSDART00000100282 N/A N/A N/A 16.840±9.65 N/A N/A 0.156±0.11 0.386±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000147830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000156406 N/A N/A N/A N/A N/A N/A N/A 0.476±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000020602 ENSDART00000100287 N/A N/A N/A 0.236±0.17 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000069849 ENST00000286371 7.470±0.00 8.511±0.00 2.334±0.00 7.307±2.65 4.694±1.46 5.629±0.34 4.640±4.02 21.918±0.00 2.279±0.36 18.546±16.11 N/A 21.602±2.55 16.309±6.80 15.487±1.69
ENST00000462082 16.977±0.00 39.514±0.00 8.174±0.00 21.001±10.08 23.867±0.00 13.145±3.79 10.956±9.26 60.176±0.00 5.783±0.00 31.560±29.39 4.771±0.00 25.971±10.05 48.588±9.74 53.811±0.00
ENST00000465172 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466678 N/A N/A N/A N/A N/A N/A N/A 0.365±0.00 N/A N/A 0.758±0.00 N/A N/A N/A
ENST00000475483 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.932±0.00 N/A N/A N/A
ENST00000482635 N/A 15.703±0.00 N/A N/A 13.083±0.00 N/A N/A N/A N/A N/A N/A 22.698±0.00 19.865±0.00 23.703±4.56
ENST00000484727 N/A 16.002±0.00 N/A N/A 8.206±0.00 N/A N/A N/A N/A N/A 1.307±0.00 N/A N/A N/A
ENST00000486782 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.696±0.00 N/A N/A N/A
ENST00000487199 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.404±0.00 N/A N/A N/A
ENST00000495216 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.574±0.00 N/A N/A N/A
ENSG00000114124 ENST00000264952 0.060±0.00 0.192±0.00 N/A 0.023±0.00 0.038±0.00 0.008±0.00 0.008±0.00 N/A 0.069±0.04 0.007±0.00 0.090±0.00 0.030±0.01 0.018±0.01 0.132±0.07
ENSG00000228398 ENST00000486956 N/A N/A N/A N/A 0.078±0.00 0.214±0.00 0.073±0.00 0.078±0.00 N/A 0.081±0.00 0.211±0.00 N/A N/A N/A
ENSG00000244124 ENST00000492725 N/A N/A N/A 2.321±0.00 0.213±0.00 0.101±0.00 N/A 0.349±0.00 1.247±0.00 0.284±0.09 N/A 6.852±9.53 0.101±0.00 0.226±0.07

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