C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00054H_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000134539-ENSG00000255819 CGP 9606 12:10226058-10410146
GeneTranscriptPositionBiotype
ENSG00000134539 (KLRD1)
killer cell lectin-like receptor subfamily D, member 1 		ENST00000336164 (KLRD1-201) 10307818-10317251 protein_coding
ENST00000344825 (KLRD1-007) 10307950-10314977 nonsense_mediated_decay
ENST00000350274 (KLRD1-202) 10307818-10317251 protein_coding
ENST00000381908 (KLRD1-001) 10304446-10329600 protein_coding
ENST00000538997 (KLRD1-010) 10307945-10311683 processed_transcript
ENST00000539374 (KLRD1-005) 10308050-10314818 nonsense_mediated_decay
ENST00000539792 (KLRD1-012) 10313494-10315637 protein_coding
ENST00000540271 (KLRD1-003) 10226066-10315009 retained_intron
ENST00000543420 (KLRD1-004) 10307950-10314977 protein_coding
ENST00000543777 (KLRD1-006) 10307950-10314977 protein_coding
ENST00000544747 (KLRD1-002) 10226058-10314819 protein_coding
ENSG00000183542 (KLRC4)
killer cell lectin-like receptor subfamily C, member 4 		ENST00000309384 (KLRC4-001) 10407382-10409757 protein_coding
ENSG00000213809 (KLRK1)
killer cell lectin-like receptor subfamily K, member 1 		ENST00000240618 (KLRK1-001) 10372353-10390018 protein_coding
ENST00000396451 (KLRK1-002) 10373185-10391874 nonsense_mediated_decay
ENST00000540267 (KLRK1-004) 10372416-10382182 retained_intron
ENST00000540818 (KLRK1-005) 10372980-10388976 protein_coding
ENST00000544449 (KLRK1-003) 10372807-10390025 retained_intron
ENSG00000245648 (RP11-277P12.20)
 ENST00000500682 (RP11-277P12.20-001) 10363769-10398506 antisense
ENSG00000255819 (KLRC4-KLRK1)
KLRC4-KLRK1 readthrough 		ENST00000539300 (KLRC4-KLRK1-002) 10372906-10409549 nonsense_mediated_decay
ENST00000539370 (KLRC4-KLRK1-001) 10379366-10409549 retained_intron
ENST00000543572 (KLRC4-KLRK1-003) 10372353-10407766 nonsense_mediated_decay
ENST00000543812 (KLRC4-KLRK1-005) 10372991-10410146 nonsense_mediated_decay
ENST00000585507 (KLRC4-KLRK1-006) 10379700-10410128 nonsense_mediated_decay
ENST00000585711 (KLRC4-KLRK1-013) 10373059-10407759 nonsense_mediated_decay
ENST00000586581 (KLRC4-KLRK1-008) 10373059-10409549 nonsense_mediated_decay
ENST00000588263 (KLRC4-KLRK1-010) 10378132-10410128 nonsense_mediated_decay
ENST00000588447 (KLRC4-KLRK1-004) 10378554-10410128 nonsense_mediated_decay
ENST00000590131 (KLRC4-KLRK1-011) 10373082-10410128 nonsense_mediated_decay
ENST00000590323 (KLRC4-KLRK1-012) 10378575-10410128 nonsense_mediated_decay
ENST00000591546 (KLRC4-KLRK1-007) 10373059-10410128 nonsense_mediated_decay
ENST00000591937 (KLRC4-KLRK1-009) 10379766-10410128 nonsense_mediated_decay
ENST00000616233 (KLRC4-KLRK1-201) 10372353-10410146 protein_coding
ENSG00000256155 (RP11-277P12.9)
 ENST00000535911 (RP11-277P12.9-001) 10358464-10361045 lincRNA
ENSG00000256288 (RP11-277P12.10)
 ENST00000539009 (RP11-277P12.10-001) 10332861-10338292 lincRNA
CIL_00054H_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030165-ENSMUSG00000030149 CGP 10090 6:129591782-129623864
GeneTranscriptPositionBiotype
ENSMUSG00000030149 (Klrk1)
killer cell lectin-like receptor subfamily K, member 1 		ENSMUST00000032252 (Klrk1-001) 129612414-129622772 protein_coding
ENSMUST00000095412 (Klrk1-002) 129610323-129623864 protein_coding
ENSMUST00000137660 (Klrk1-004) 129616568-129622684 retained_intron
ENSMUST00000152256 (Klrk1-003) 129616493-129622581 retained_intron
ENSMUST00000168919 (Klrk1-201) 129610323-129623864 protein_coding
ENSMUSG00000030165 (Klrd1)
killer cell lectin-like receptor, subfamily D, member 1 		ENSMUST00000032268 (Klrd1-201) 129591782-129598469 protein_coding
ENSMUST00000112063 (Klrd1-001) 129591782-129598775 protein_coding
ENSMUST00000119520 (Klrd1-002) 129591810-129598770 protein_coding
ENSMUST00000159077 (Klrd1-004) 129596490-129598452 retained_intron
ENSMUST00000159804 (Klrd1-003) 129591825-129598613 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00054H_0001ENSG00000134539ENST00000336164ENST00000344825ENST00000350274ENST00000381908ENST00000538997ENST00000539374ENST00000540271ENST00000543777ENST00000544747ENSG00000183542ENST00000309384ENSG00000213809ENST00000240618ENST00000396451ENST00000540267ENST00000544449ENSG00000245648ENST00000500682ENSG00000255819ENST00000539300ENST00000543572ENST00000586581ENST00000588263ENST00000588447ENST00000591937ENSG00000256155ENST00000535911ENSG00000256288ENST00000539009CIL_00054H_0002ENSMUSG00000030149ENSMUST00000032252ENSMUST00000095412ENSMUST00000137660ENSMUST00000152256ENSMUST00000168919ENSMUSG00000030165ENSMUST00000032268ENSMUST00000112063ENSMUST00000119520ENSMUST00000159077ENSMUST00000159804
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000134539 ENST00000336164 N/A N/A N/A N/A 0.240±0.00 N/A N/A N/A 0.162±0.00 N/A N/A 0.276±0.00 0.336±0.20 0.759±0.00
ENST00000344825 N/A N/A N/A N/A N/A N/A N/A N/A 0.697±0.00 N/A N/A N/A N/A N/A
ENST00000350274 N/A N/A N/A N/A N/A 0.210±0.00 N/A N/A N/A N/A 0.074±0.00 N/A N/A N/A
ENST00000381908 0.111±0.00 0.264±0.00 N/A 0.124±0.00 0.144±0.02 0.019±0.00 0.060±0.00 0.113±0.00 0.037±0.00 N/A 0.018±0.00 0.051±0.01 0.056±0.00 0.166±0.00
ENST00000538997 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.533±0.00 N/A N/A
ENST00000539374 N/A N/A N/A N/A 1.068±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539792 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540271 N/A N/A N/A N/A N/A N/A 0.088±0.00 0.244±0.00 N/A 0.930±0.00 0.015±0.00 0.109±0.00 N/A N/A
ENST00000543420 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543777 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.499±0.00 N/A
ENST00000544747 N/A N/A N/A 0.059±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000183542 ENST00000309384 N/A N/A N/A 0.093±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000213809 ENST00000240618 N/A 6.412±0.00 N/A 0.055±0.00 0.860±0.35 0.680±0.39 0.200±0.00 2.061±0.00 0.252±0.00 3.200±0.17 0.041±0.00 1.150±0.37 0.746±0.40 1.276±0.04
ENST00000396451 N/A N/A N/A N/A N/A 2.203±0.00 N/A N/A 2.014±0.00 N/A N/A N/A N/A N/A
ENST00000540267 N/A N/A N/A N/A N/A N/A N/A N/A 0.117±0.00 N/A N/A N/A N/A 1.380±0.00
ENST00000540818 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544449 0.086±0.00 1.325±0.00 N/A 0.113±0.00 0.316±0.00 N/A 0.094±0.00 N/A N/A 0.949±0.00 0.094±0.08 0.380±0.00 0.067±0.00 0.935±0.00
ENSG00000245648 ENST00000500682 0.042±0.00 N/A N/A 0.095±0.01 N/A 0.058±0.00 N/A 0.170±0.00 0.254±0.00 1.150±0.00 0.019±0.00 0.779±0.47 0.054±0.01 0.181±0.00
ENSG00000255819 ENST00000539300 N/A N/A N/A N/A N/A N/A N/A N/A 0.815±0.00 N/A N/A N/A N/A N/A
ENST00000539370 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543572 N/A N/A N/A N/A 0.984±0.00 N/A N/A N/A N/A 2.901±0.00 N/A N/A N/A N/A
ENST00000543812 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585507 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585711 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586581 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.119±0.00 N/A
ENST00000588263 N/A N/A N/A N/A N/A N/A 0.377±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000588447 N/A N/A N/A 0.246±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590131 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591546 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591937 N/A N/A N/A N/A N/A N/A N/A 0.857±0.62 N/A 3.852±0.00 N/A N/A N/A N/A
ENST00000616233 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000256155 ENST00000535911 N/A N/A N/A N/A 0.024±0.00 N/A 0.353±0.31 N/A N/A N/A N/A 0.034±0.00 0.158±0.00 0.045±0.00
ENSG00000256288 ENST00000539009 0.031±0.00 0.163±0.00 0.249±0.00 0.111±0.00 0.035±0.00 N/A 0.059±0.00 0.067±0.00 N/A 0.137±0.01 0.219±0.00 0.075±0.00 0.087±0.00 0.141±0.08
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030149 ENSMUST00000032252 0.330±0.00 0.268±0.12 0.590±0.01 N/A 0.525±0.15 0.179±0.06 0.026±0.00 0.110±0.04 0.154±0.09 0.452±0.11 0.068±0.09 0.299±0.17 0.112±0.03 N/A
ENSMUST00000095412 0.204±0.04 0.031±0.00 0.200±0.06 0.020±0.02 0.343±0.00 0.064±0.04 0.085±0.05 0.071±0.04 0.091±0.04 0.326±0.00 0.033±0.03 0.087±0.05 0.020±0.02 0.014±0.01
ENSMUST00000137660 0.396±0.00 N/A N/A N/A 1.403±0.00 N/A 0.144±0.07 0.199±0.00 0.435±0.00 N/A 0.105±0.00 0.344±0.00 N/A N/A
ENSMUST00000152256 N/A N/A N/A N/A N/A N/A 0.034±0.00 0.119±0.07 0.201±0.00 N/A N/A N/A N/A N/A
ENSMUST00000168919 N/A 0.031±0.00 N/A 0.002±0.00 0.358±0.00 0.060±0.03 0.007±0.00 0.031±0.02 0.046±0.02 0.181±0.06 N/A 0.052±0.02 0.002±0.00 0.014±0.01
ENSMUSG00000030165 ENSMUST00000032268 0.263±0.09 N/A N/A N/A 1.227±0.09 0.253±0.03 0.156±0.09 0.378±0.14 0.192±0.00 0.428±0.24 N/A 0.353±0.16 0.056±0.00 N/A
ENSMUST00000112063 0.800±0.58 0.337±0.09 1.075±0.31 0.033±0.00 N/A N/A 0.366±0.15 0.179±0.00 0.291±0.18 0.452±0.09 0.276±0.33 0.512±0.29 0.129±0.09 N/A
ENSMUST00000119520 N/A N/A N/A N/A 0.861±0.56 N/A N/A N/A 0.204±0.00 0.357±0.19 N/A N/A N/A N/A
ENSMUST00000159077 0.339±0.19 N/A 0.502±0.00 0.050±0.00 0.530±0.04 N/A N/A N/A 0.191±0.10 0.699±0.19 0.146±0.07 0.510±0.39 0.055±0.00 N/A
ENSMUST00000159804 N/A N/A N/A N/A N/A N/A N/A N/A 0.187±0.00 N/A N/A 0.127±0.00 0.328±0.22 N/A

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