C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00058T_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000183665-ENSG00000170881 CGP 9606 8:124450820-124487914
GeneTranscriptPositionBiotype
ENSG00000170881 (RNF139)
ring finger protein 139 		ENST00000303545 (RNF139-001) 124474738-124487914 protein_coding
ENST00000517684 (RNF139-002) 124483345-124486234 protein_coding
ENSG00000183665 (TRMT12)
tRNA methyltransferase 12 homolog (S. cerevisiae) 		ENST00000328599 (TRMT12-001) 124450820-124453026 protein_coding
ENST00000521443 (TRMT12-003) 124450820-124462150 processed_transcript
ENST00000522518 (TRMT12-002) 124450917-124452741 nonsense_mediated_decay
ENSG00000245149 (RNF139-AS1)
RNF139 antisense RNA 1 (head to head) 		ENST00000499418 (RNF139-AS1-001) 124462485-124474564 lincRNA
ENST00000519861 (RNF139-AS1-002) 124472808-124474354 lincRNA
ENST00000530778 (RNF139-AS1-003) 124472810-124474576 lincRNA
CIL_00058T_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037085-ENSMUSG00000037075 CGP 10090 15:58872649-58902390
GeneTranscriptPositionBiotype
ENSMUSG00000037075 (Rnf139)
ring finger protein 139 		ENSMUST00000036904 (Rnf139-201) 58889229-58902390 protein_coding
ENSMUSG00000037085 (Trmt12)
tRNA methyltranferase 12 		ENSMUST00000036937 (Trmt12-201) 58872649-58876781 protein_coding
ENSMUSG00000050891 (Tatdn1)
TatD DNase domain containing 1 		ENSMUST00000110155 (Tatdn1-201) 58890153-58933730 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00058T_0001ENSG00000170881ENST00000303545ENST00000517684ENSG00000183665ENST00000328599ENST00000521443ENST00000522518ENSG00000245149ENST00000499418ENST00000519861ENST00000530778CIL_00058T_0002ENSMUSG00000037075ENSMUST00000036904ENSMUSG00000037085ENSMUST00000036937ENSMUSG00000050891ENSMUST00000110155
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00058T_0001ENSG00000170881ENST00000303545ENSG00000183665ENST00000328599ENST00000522518ENSG00000245149ENST00000499418ENST00000519861ENST00000530778CIL_00058T_0002ENSMUSG00000037075ENSMUST00000036904ENSMUSG00000037085ENSMUST00000036937ENSMUSG00000050891ENSMUST00000110155
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000170881 ENST00000303545 10.191±0.00 12.130±0.00 1.950±0.00 6.079±2.99 7.171±2.53 4.832±1.52 4.256±1.29 5.505±0.46 3.293±1.00 6.385±0.81 4.494±1.80 9.562±4.60 7.367±1.27 29.540±2.64
ENST00000517684 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000183665 ENST00000328599 1.614±0.00 3.637±0.00 N/A 2.979±1.18 2.433±0.97 1.861±0.16 1.874±0.69 2.910±0.00 1.841±0.62 1.155±0.58 1.677±0.55 4.608±1.25 2.527±1.02 4.492±1.48
ENST00000521443 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522518 N/A N/A N/A N/A N/A N/A N/A N/A 0.654±0.00 1.757±0.00 1.648±0.00 N/A N/A N/A
ENSG00000245149 ENST00000499418 0.022±0.00 0.219±0.00 0.086±0.00 0.119±0.05 0.079±0.00 0.077±0.02 0.045±0.02 0.092±0.03 0.071±0.05 0.099±0.02 0.071±0.00 0.098±0.02 0.035±0.02 0.141±0.06
ENST00000519861 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.137±0.00 N/A
ENST00000530778 0.186±0.00 0.379±0.00 0.345±0.00 0.503±0.13 0.308±0.20 0.262±0.15 0.091±0.07 0.516±0.13 0.044±0.00 0.374±0.12 N/A 1.351±0.79 0.105±0.06 0.922±0.69
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000037075 ENSMUST00000036904 10.576±2.78 17.396±6.61 9.599±0.45 8.840±2.69 13.626±1.86 12.095±2.53 10.833±0.60 12.007±1.17 15.339±4.53 15.045±0.57 4.607±3.24 19.053±8.35 9.361±4.93 83.495±21.68
ENSMUSG00000037085 ENSMUST00000036937 1.580±0.31 1.314±0.35 1.684±0.13 1.248±0.20 1.438±0.23 1.631±0.21 0.864±0.11 1.595±0.21 1.663±0.85 1.642±0.06 0.966±0.17 2.181±0.75 1.052±0.46 0.882±0.27
ENSMUSG00000050891 ENSMUST00000110155 1.525±0.33 0.234±0.11 4.826±0.84 3.513±0.50 0.840±0.41 0.482±0.18 1.285±0.17 0.979±0.24 3.159±1.94 0.656±0.06 6.845±0.53 1.566±1.84 4.872±0.74 0.622±0.23

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