C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 139
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000303545 RNF139-001 ENSG00000170881 9606 + 8:124474738-124487914 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000303545
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000303545 10.191±0.00 12.130±0.00 1.950±0.00 6.079±2.99 7.171±2.53 4.832±1.52 4.256±1.29 5.505±0.46 3.293±1.00 6.385±0.81 4.494±1.80 9.562±4.60 7.367±1.27 29.540±2.64

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00058T CIL_00058T_0001 CGP 8:124450820-124487914
CIL_0004ZH CIL_0004ZH_0001 CGP 8:124474738-124539458

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0004872 TAS receptor activity
GO:0005515 IPI:IEA protein binding
GO:0005783 IDA endoplasmic reticulum
GO:0008270 IEA zinc ion binding
GO:0008285 IDA negative regulation of cell proliferation
GO:0016021 TAS integral component of membrane
GO:0016567 IEA protein ubiquitination
GO:0016874 TAS ligase activity
GO:0017148 IDA negative regulation of translation
GO:0019787 IDA small conjugating protein ligase activity
GO:0031396 IDA regulation of protein ubiquitination
GO:0046872 IEA metal ion binding
GO:0060628 IDA regulation of ER to Golgi vesicle-mediated transport
GO:0070613 IDA regulation of protein processing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000036904 Rnf139-201 protein_coding Mus_musculus 0 3199

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