C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TatD DNase domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110155 Tatdn1-201 ENSMUSG00000050891 10090 - 15:58890153-58933730 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000110155
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000110155 1.525±0.33 0.234±0.11 4.826±0.84 3.513±0.50 0.840±0.41 0.482±0.18 1.285±0.17 0.979±0.24 3.159±1.94 0.656±0.06 6.845±0.53 1.566±1.84 4.872±0.74 0.622±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00058T CIL_00058T_0002 CGP 15:58872649-58902390
CIL_0004ZH CIL_0004ZH_0002 CGP 15:58889229-58933730
CIL_0004ZG CIL_0004ZG_0002 CGP 15:58890153-58939489

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000737 IEA DNA catabolic process, endonucleolytic
GO:0004536 IBA deoxyribonuclease activity
GO:0005634 IEA nucleus
GO:0006308 IBA DNA catabolic process
GO:0016888 IEA endodeoxyribonuclease activity, producing 5'-phosphomonoesters
GO:0043229 IBA intracellular organelle
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000276692 TATDN1-001 protein_coding Homo_sapiens 0 1005
ENST00000414123 TATDN1P1-001 processed_pseudogene Homo_sapiens 0 907
ENST00000517678 TATDN1-010 protein_coding Homo_sapiens 0 739
ENST00000518133 TATDN1-014 processed_transcript Homo_sapiens 0 261
ENST00000518485 TATDN1-018 retained_intron Homo_sapiens 0 381
ENST00000519232 TATDN1-013 protein_coding Homo_sapiens 0 608
ENST00000519548 TATDN1-002 protein_coding Homo_sapiens 0 821
ENST00000519776 TATDN1-007 nonsense_mediated_decay Homo_sapiens 0 662
ENST00000520321 TATDN1-016 nonsense_mediated_decay Homo_sapiens 0 464
ENST00000520938 TATDN1-009 nonsense_mediated_decay Homo_sapiens 0 326
ENST00000521546 TATDN1-012 processed_transcript Homo_sapiens 0 723
ENST00000521973 TATDN1-019 processed_transcript Homo_sapiens 0 466
ENST00000522280 TATDN1-017 retained_intron Homo_sapiens 1.4013e-45 187
ENST00000522310 TATDN1-008 nonsense_mediated_decay Homo_sapiens 0 464
ENST00000522810 TATDN1-004 protein_coding Homo_sapiens 0 732
ENST00000522927 TATDN1-015 nonsense_mediated_decay Homo_sapiens 0 527
ENST00000523152 TATDN1-006 protein_coding Homo_sapiens 0 313
ENST00000523214 TATDN1-003 nonsense_mediated_decay Homo_sapiens 0 741
ENST00000523888 TATDN1-011 protein_coding Homo_sapiens 0 416
ENST00000605953 TATDN1-020 protein_coding Homo_sapiens 0 739

Loading