C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00059B_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000171135-ENSG00000163701 CGP 9606 3:9890554-9916402
GeneTranscriptPositionBiotype
ENSG00000163701 (IL17RE)
interleukin 17 receptor E
ENST00000383814 (IL17RE-001) 9902828-9916402 protein_coding
ENST00000383815 (IL17RE-007) 9902850-9916398 nonsense_mediated_decay
ENST00000421412 (IL17RE-002) 9902619-9915844 protein_coding
ENST00000434065 (IL17RE-006) 9902848-9916395 nonsense_mediated_decay
ENST00000444427 (IL17RE-005) 9902848-9911538 nonsense_mediated_decay
ENST00000454190 (IL17RE-003) 9902848-9916402 protein_coding
ENST00000454992 (IL17RE-010) 9902882-9907074 protein_coding
ENST00000461534 (IL17RE-008) 9902612-9903380 retained_intron
ENST00000480244 (IL17RE-012) 9911257-9911814 retained_intron
ENST00000483258 (IL17RE-011) 9910865-9911405 retained_intron
ENST00000489181 (IL17RE-004) 9902831-9910390 retained_intron
ENSG00000171135 (JAGN1)
jagunal homolog 1 (Drosophila)
ENST00000307768 (JAGN1-001) 9890554-9894349 protein_coding
ENST00000489724 (JAGN1-002) 9890633-9892971 processed_transcript
ENST00000616966 (JAGN1-201) 9890587-9894349 protein_coding
CIL_00059B_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000051256-ENSMUSG00000043088 CGP 10090 6:113442569-113470751
GeneTranscriptPositionBiotype
ENSMUSG00000043088 (Il17re)
interleukin 17 receptor E
ENSMUST00000053569 (Il17re-201) 113458895-113470143 protein_coding
ENSMUST00000058548 (Il17re-202) 113458484-113470751 protein_coding
ENSMUST00000101065 (Il17re-203) 113458895-113470143 protein_coding
ENSMUSG00000051256 (Jagn1)
jagunal homolog 1 (Drosophila)
ENSMUST00000101070 (Jagn1-001) 113442569-113448229 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00059B_0001ENSG00000163701ENST00000383814ENST00000383815ENST00000421412ENST00000434065ENST00000444427ENST00000454190ENST00000454992ENST00000461534ENST00000480244ENST00000483258ENST00000489181ENSG00000171135ENST00000307768ENST00000489724ENST00000616966CIL_00059B_0002ENSMUSG00000043088ENSMUST00000053569ENSMUST00000058548ENSMUST00000101065ENSMUSG00000051256ENSMUST00000101070
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00059B_0001ENSG00000163701ENST00000383814ENST00000383815ENST00000421412ENST00000434065ENST00000444427ENST00000454190ENST00000454992ENST00000483258ENST00000489181ENSG00000171135ENST00000307768ENST00000616966CIL_00059B_0002ENSMUSG00000043088ENSMUST00000053569ENSMUST00000058548ENSMUST00000101065ENSMUSG00000051256ENSMUST00000101070
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000163701 ENST00000383814 1.689±0.00 0.270±0.00 N/A N/A 4.353±0.00 N/A 0.099±0.00 1.186±0.00 0.046±0.00 0.959±0.00 0.246±0.00 0.767±0.65 1.590±0.87 N/A
ENST00000383815 0.224±0.00 0.673±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.732±0.00 N/A N/A
ENST00000421412 N/A N/A N/A 0.055±0.00 N/A N/A 0.100±0.00 N/A 0.073±0.00 0.699±0.00 N/A N/A 1.455±0.00 N/A
ENST00000434065 N/A N/A N/A 0.079±0.05 1.798±1.51 N/A N/A 1.059±0.00 0.231±0.00 1.937±0.00 N/A 3.059±3.20 1.786±0.91 N/A
ENST00000444427 N/A N/A N/A N/A N/A N/A 0.074±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000454190 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.126±0.28 1.167±0.39 0.698±0.00
ENST00000454992 N/A N/A N/A N/A 1.393±0.00 N/A N/A N/A N/A N/A 0.177±0.00 N/A N/A N/A
ENST00000461534 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480244 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483258 N/A N/A N/A N/A N/A N/A N/A N/A 0.238±0.00 N/A N/A N/A N/A N/A
ENST00000489181 N/A N/A 0.226±0.00 0.091±0.00 N/A 0.581±0.19 0.038±0.00 N/A N/A 0.267±0.00 N/A 1.257±0.00 N/A 0.067±0.00
ENSG00000171135 ENST00000307768 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.226±0.00 N/A
ENST00000489724 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000616966 11.654±0.00 11.682±0.00 1.121±0.00 4.234±1.38 6.611±4.89 6.311±4.83 3.517±3.01 9.520±6.30 10.202±7.53 4.209±2.94 7.128±4.07 9.832±5.94 15.773±7.17 7.144±3.22
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000043088 ENSMUST00000053569 3.660±1.89 0.298±0.00 8.067±2.28 0.096±0.05 2.497±0.00 3.497±0.71 0.253±0.15 2.654±0.97 0.054±0.03 5.422±1.03 0.193±0.04 3.867±1.38 0.485±0.19 1.339±0.23
ENSMUST00000058548 3.959±2.56 0.368±0.21 15.690±2.25 0.035±0.00 4.118±2.32 9.885±2.35 0.169±0.01 4.580±1.91 0.063±0.04 9.882±0.81 0.124±0.06 4.623±1.93 0.427±0.19 0.749±0.08
ENSMUST00000101065 1.181±0.37 0.200±0.03 6.258±1.08 N/A 2.150±0.51 3.887±0.96 N/A 3.099±1.87 0.077±0.04 2.966±0.00 0.138±0.07 4.335±2.53 0.210±0.00 N/A
ENSMUSG00000051256 ENSMUST00000101070 32.516±4.02 36.565±3.50 21.705±6.85 11.867±5.46 22.744±5.77 24.621±6.57 13.274±2.39 27.004±6.37 21.372±6.47 22.037±3.84 13.730±2.20 43.091±16.61 18.178±9.01 14.953±6.21

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