C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: jagunal homolog 1 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000101070 Jagn1-001 ENSMUSG00000051256 10090 + 6:113442569-113448229 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000101070
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000101070 32.516±4.02 36.565±3.50 21.705±6.85 11.867±5.46 22.744±5.77 24.621±6.57 13.274±2.39 27.004±6.37 21.372±6.47 22.037±3.84 13.730±2.20 43.091±16.61 18.178±9.01 14.953±6.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00059E CIL_00059E_0002 CGP 6:113424634-113448229
CIL_00059B CIL_00059B_0002 CGP 6:113442569-113470751

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002446 IMP neutrophil mediated immunity
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005783 ISS endoplasmic reticulum
GO:0005789 IEA endoplasmic reticulum membrane
GO:0007029 IEA endoplasmic reticulum organization
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0016192 IEA vesicle-mediated transport
GO:0030223 IEA neutrophil differentiation
GO:0038158 IMP granulocyte colony-stimulating factor signaling pathway
GO:0050832 IMP defense response to fungus
GO:1990266 IMP neutrophil migration

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000307768 JAGN1-001 protein_coding Homo_sapiens 0 813
ENST00000489724 JAGN1-002 processed_transcript Homo_sapiens 3e-39 165
ENST00000616966 JAGN1-201 protein_coding Homo_sapiens 0 780

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