C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interleukin 17 receptor E
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000058548 Il17re-202 ENSMUSG00000043088 10090 + 6:113458484-113470751 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000058548
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000058548 3.959±2.56 0.368±0.21 15.690±2.25 0.035±0.00 4.118±2.32 9.885±2.35 0.169±0.01 4.580±1.91 0.063±0.04 9.882±0.81 0.124±0.06 4.623±1.93 0.427±0.19 0.749±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00059B CIL_00059B_0002 CGP 6:113442569-113470751
CIL_0001AC CIL_0001AC_0002 CGP 6:113458484-113483140

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005576 IEA extracellular region
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0006954 IEA inflammatory response
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000383814 IL17RE-001 protein_coding Homo_sapiens 0 1280
ENST00000383815 IL17RE-007 nonsense_mediated_decay Homo_sapiens 0 828
ENST00000421412 IL17RE-002 protein_coding Homo_sapiens 0 1280
ENST00000434065 IL17RE-006 nonsense_mediated_decay Homo_sapiens 0 1284
ENST00000454190 IL17RE-003 protein_coding Homo_sapiens 0 828
ENST00000489181 IL17RE-004 retained_intron Homo_sapiens 0 398

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