C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005GE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000073712-ENSG00000100523 CGP 9606 14:52857268-53153282
GeneTranscriptPositionBiotype
ENSG00000073712 (FERMT2)
fermitin family member 2 		ENST00000341590 (FERMT2-001) 52857268-52951097 protein_coding
ENST00000343279 (FERMT2-201) 52857275-52950992 protein_coding
ENST00000395631 (FERMT2-002) 52857268-52951035 protein_coding
ENST00000399304 (FERMT2-004) 52859488-52951018 protein_coding
ENST00000553373 (FERMT2-003) 52858377-52950568 protein_coding
ENST00000553663 (FERMT2-005) 52859306-52864521 protein_coding
ENST00000553768 (FERMT2-013) 52859573-52873710 processed_transcript
ENST00000554152 (FERMT2-007) 52857271-52919339 protein_coding
ENST00000554288 (FERMT2-009) 52881109-52928420 protein_coding
ENST00000554712 (FERMT2-012) 52893359-52952435 protein_coding
ENST00000555546 (FERMT2-008) 52857272-52861303 retained_intron
ENST00000555692 (FERMT2-010) 52893288-52928399 protein_coding
ENST00000557255 (FERMT2-006) 52857271-52863677 processed_transcript
ENST00000557562 (FERMT2-011) 52893376-52950911 nonsense_mediated_decay
ENSG00000100523 (DDHD1)
DDHD domain containing 1 		ENST00000323669 (DDHD1-003) 53043968-53153098 protein_coding
ENST00000357758 (DDHD1-001) 53043968-53153282 protein_coding
ENST00000395606 (DDHD1-002) 53036745-53153204 protein_coding
ENST00000553406 (DDHD1-009) 53091911-53093851 retained_intron
ENST00000555400 (DDHD1-005) 53052510-53061324 retained_intron
ENST00000555621 (DDHD1-008) 53048548-53053086 processed_transcript
ENST00000556027 (DDHD1-004) 53046027-53093664 retained_intron
ENST00000556910 (DDHD1-006) 53093322-53150086 protein_coding
ENST00000557445 (DDHD1-007) 53103299-53152400 retained_intron
ENST00000612692 (DDHD1-201) 53036745-53153098 protein_coding
ENSG00000258503 (RP11-368P15.1)
 ENST00000554238 (RP11-368P15.1-001) 53011971-53012267 processed_pseudogene
ENSG00000258993 (RP11-368P15.2)
 ENST00000553515 (RP11-368P15.2-001) 53023055-53023597 processed_pseudogene
ENSG00000271075 (RP11-589M4.4)
 ENST00000605879 (RP11-589M4.4-001) 52871458-52872217 processed_pseudogene
CIL_0005GE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037712-ENSMUSG00000037697 CGP 10090 14:45458792-45658143
GeneTranscriptPositionBiotype
ENSMUSG00000037697 (Ddhd1)
DDHD domain containing 1 		ENSMUST00000051310 (Ddhd1-009) 45593174-45658143 protein_coding
ENSMUST00000087320 (Ddhd1-002) 45594651-45658098 protein_coding
ENSMUST00000111828 (Ddhd1-001) 45595417-45658142 protein_coding
ENSMUST00000126428 (Ddhd1-007) 45605004-45609342 retained_intron
ENSMUST00000129599 (Ddhd1-004) 45594722-45623190 retained_intron
ENSMUST00000141487 (Ddhd1-010) 45595327-45620786 nonsense_mediated_decay
ENSMUST00000147551 (Ddhd1-006) 45620712-45657401 processed_transcript
ENSMUST00000149286 (Ddhd1-003) 45594651-45658098 nonsense_mediated_decay
ENSMUST00000152110 (Ddhd1-011) 45593485-45621275 retained_intron
ENSMUST00000153547 (Ddhd1-008) 45628407-45657418 retained_intron
ENSMUST00000156758 (Ddhd1-005) 45594935-45602727 nonsense_mediated_decay
ENSMUSG00000037712 (Fermt2)
fermitin family homolog 2 (Drosophila) 		ENSMUST00000045905 (Fermt2-001) 45458792-45530118 protein_coding
ENSMUST00000141424 (Fermt2-004) 45469314-45477861 protein_coding
ENSMUST00000149723 (Fermt2-002) 45504672-45529786 processed_transcript
ENSMUST00000150660 (Fermt2-003) 45475898-45529964 protein_coding
ENSMUSG00000085913 (Gm15601)
predicted gene 15601 		ENSMUST00000122972 (Gm15601-001) 45587740-45598512 antisense
ENSMUSG00000088769 (Gm22637)
predicted gene, 22637 		ENSMUST00000158144 (Gm22637-201) 45461363-45461645 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005GE_0001ENSG00000073712ENST00000341590ENST00000343279ENST00000395631ENST00000399304ENST00000553373ENST00000554152ENST00000554288ENST00000555546ENST00000557255ENSG00000100523ENST00000323669ENST00000357758ENST00000395606ENST00000556027ENST00000612692ENSG00000258503ENST00000554238ENSG00000258993ENST00000553515ENSG00000271075ENST00000605879CIL_0005GE_0002ENSMUSG00000037697ENSMUST00000051310ENSMUST00000087320ENSMUST00000111828ENSMUST00000126428ENSMUST00000129599ENSMUST00000141487ENSMUST00000147551ENSMUST00000149286ENSMUST00000152110ENSMUSG00000037712ENSMUST00000045905ENSMUST00000149723ENSMUST00000150660ENSMUSG00000085913ENSMUST00000122972ENSMUSG00000088769ENSMUST00000158144
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000073712 ENST00000341590 36.641±0.00 21.864±0.00 4.013±0.00 6.156±2.34 27.508±15.27 18.420±9.63 6.857±4.81 12.236±2.83 14.778±9.41 20.163±11.20 4.192±0.00 11.544±8.79 37.406±2.50 9.563±7.55
ENST00000343279 N/A N/A N/A 3.388±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.840±0.00
ENST00000395631 N/A N/A N/A N/A 7.645±0.00 12.103±0.00 N/A N/A N/A 5.983±0.00 N/A N/A N/A N/A
ENST00000399304 N/A N/A N/A N/A N/A 2.538±0.00 N/A N/A N/A N/A 1.827±0.00 N/A N/A N/A
ENST00000553373 N/A N/A 1.571±0.00 N/A 3.854±0.00 N/A 2.789±0.00 3.070±0.00 7.319±0.00 4.912±0.00 N/A 1.264±0.00 9.589±0.00 3.112±0.00
ENST00000553663 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553768 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554152 N/A N/A N/A 2.713±0.83 N/A N/A 10.800±0.00 N/A N/A N/A 1.477±0.00 N/A N/A N/A
ENST00000554288 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.596±0.00 N/A N/A N/A
ENST00000554712 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555546 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.981±0.00 N/A N/A N/A
ENST00000555692 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557255 N/A N/A N/A N/A 1.658±0.00 N/A N/A 1.327±0.00 N/A N/A N/A 0.643±0.00 N/A 0.530±0.00
ENST00000557562 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000100523 ENST00000323669 0.572±0.00 1.022±0.00 N/A N/A 0.855±0.23 0.675±0.19 N/A 0.892±0.00 0.186±0.00 N/A 0.364±0.00 1.230±0.42 1.197±0.51 10.343±2.13
ENST00000357758 1.061±0.00 0.629±0.00 0.604±0.00 2.631±0.06 N/A 0.546±0.02 0.533±0.39 N/A 1.027±0.90 N/A 0.162±0.03 1.010±0.27 0.748±0.00 5.863±3.81
ENST00000395606 N/A 0.335±0.00 N/A 1.118±0.36 0.610±0.00 0.426±0.00 0.108±0.00 0.326±0.00 N/A 0.747±0.00 0.074±0.00 0.440±0.16 0.618±0.41 N/A
ENST00000553406 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555400 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555621 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556027 N/A N/A N/A 1.240±0.00 1.068±0.00 0.762±0.00 0.274±0.00 N/A 1.201±0.00 N/A 0.228±0.00 N/A N/A N/A
ENST00000556910 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557445 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612692 N/A 0.472±0.00 N/A N/A 0.328±0.00 0.394±0.00 N/A 0.191±0.00 0.125±0.00 0.708±0.00 N/A 0.615±0.00 0.323±0.04 0.983±0.00
ENSG00000258503 ENST00000554238 N/A 0.047±0.00 N/A 0.468±0.00 N/A 0.043±0.00 N/A N/A N/A 0.045±0.00 N/A N/A N/A N/A
ENSG00000258993 ENST00000553515 N/A N/A N/A N/A 0.153±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.263±0.17
ENSG00000271075 ENST00000605879 N/A N/A 0.581±0.00 0.181±0.00 N/A 0.018±0.00 0.037±0.00 0.060±0.00 N/A N/A N/A 0.082±0.00 0.107±0.04 0.062±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000037697 ENSMUST00000051310 2.429±0.51 1.418±0.22 2.017±0.33 5.297±1.86 2.683±0.47 1.202±0.33 0.635±0.00 1.404±0.46 2.296±0.71 2.709±0.90 0.236±0.02 3.202±0.92 1.435±0.56 10.311±1.52
ENSMUST00000087320 1.947±0.00 N/A 1.644±0.00 N/A 1.260±0.00 0.777±0.00 0.784±0.00 0.993±0.00 2.532±1.03 N/A 0.478±0.19 2.951±0.26 1.667±0.00 N/A
ENSMUST00000111828 4.448±0.93 7.454±2.00 N/A N/A 4.655±1.53 2.565±0.74 1.538±0.07 1.953±0.63 2.371±0.87 6.034±1.06 0.463±0.00 5.897±3.00 1.855±0.17 45.825±16.78
ENSMUST00000126428 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.823±0.00 6.394±0.00 N/A
ENSMUST00000129599 2.047±0.37 N/A 3.885±0.11 5.530±0.03 2.423±0.80 N/A 0.953±0.14 1.454±0.36 6.393±2.50 N/A 0.438±0.07 4.586±0.14 3.320±0.85 N/A
ENSMUST00000141487 N/A N/A 3.325±0.00 11.844±0.00 N/A N/A N/A N/A N/A N/A N/A 9.470±2.48 5.162±1.23 34.806±13.80
ENSMUST00000147551 N/A N/A N/A 30.479±0.00 N/A N/A N/A N/A N/A N/A N/A 25.112±0.00 14.792±7.01 134.624±0.00
ENSMUST00000149286 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.006±0.80 N/A N/A
ENSMUST00000152110 N/A N/A 1.290±0.06 N/A N/A 2.340±0.00 N/A N/A N/A N/A N/A 1.743±0.00 N/A N/A
ENSMUST00000153547 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156758 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000037712 ENSMUST00000045905 24.923±2.47 8.579±0.74 87.744±19.85 11.017±1.50 22.982±4.77 7.815±2.13 10.672±2.57 18.420±3.01 13.548±3.41 66.162±11.21 7.146±0.50 32.619±4.50 62.327±12.70 2.879±1.12
ENSMUST00000141424 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149723 N/A 13.239±5.62 N/A N/A N/A 6.995±0.00 N/A N/A N/A 40.820±0.00 N/A 24.101±6.25 N/A N/A
ENSMUST00000150660 N/A N/A N/A 10.349±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000085913 ENSMUST00000122972 1.613±0.00 N/A N/A N/A 1.112±0.14 N/A N/A N/A 1.662±0.00 1.765±0.00 N/A N/A N/A N/A
ENSMUSG00000088769 ENSMUST00000158144 2.263±0.23 N/A 3.898±0.81 1.444±0.25 2.059±1.15 1.234±0.80 2.264±0.88 0.846±0.36 1.335±0.50 4.926±1.98 0.432±0.22 3.513±2.41 2.746±0.98 0.330±0.00

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