C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0005HF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000073720-ENSDARG00000093745 CGP 7955 8:32771900-32791477
GeneTranscriptPositionBiotype
ENSDARG00000073720 (RNF180 (2 of 2))
ring finger protein 180
ENSDART00000137647 (RNF180 (2 of 2)-001) 32771900-32786406 protein_coding
ENSDARG00000089526 (BX571721.1)
ENSDART00000122044 (BX571721.1-201) 32789794-32790978 pseudogene
ENSDARG00000093745 (htr1aa)
5-hydroxytryptamine (serotonin) receptor 1A a
ENSDART00000138217 (htr1aa-001) 32789692-32791477 protein_coding
CIL_0005HF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021720-ENSMUSG00000021721 CGP 10090 13:105149352-105448133
GeneTranscriptPositionBiotype
ENSMUSG00000021720 (Rnf180)
ring finger protein 180
ENSMUST00000069686 (Rnf180-201) 105149352-105271039 protein_coding
ENSMUSG00000021721 (Htr1a)
5-hydroxytryptamine (serotonin) receptor 1A
ENSMUST00000022235 (Htr1a-201) 105443693-105448133 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005HF_0001ENSDARG00000073720ENSDART00000137647ENSDARG00000089526ENSDART00000122044ENSDARG00000093745ENSDART00000138217CIL_0005HF_0002ENSMUSG00000021720ENSMUST00000069686ENSMUSG00000021721ENSMUST00000022235
Region; Gene Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005HF_0001ENSDARG00000073720ENSDART00000137647ENSDARG00000089526ENSDART00000122044ENSDARG00000093745ENSDART00000138217CIL_0005HF_0002ENSMUSG00000021720ENSMUST00000069686ENSMUSG00000021721ENSMUST00000022235
Gene Transcript Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000073720 ENSDART00000137647 N/A N/A 0.222±0.10 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000089526 ENSDART00000122044 N/A N/A N/A N/A N/A 0.109±0.08 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000093745 ENSDART00000138217 N/A N/A 7.359±4.38 N/A N/A 0.085±0.00 0.038±0.00 N/A N/A 0.281±0.00 N/A N/A N/A
Gene Transcript Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021720 ENSMUST00000069686 0.406±0.08 0.379±0.00 2.643±0.52 0.744±0.20 1.142±0.68 0.150±0.02 0.392±0.04 0.085±0.03 0.846±0.21 0.058±0.03 3.496±1.31 0.325±0.10 3.201±0.00
ENSMUSG00000021721 ENSMUST00000022235 N/A 0.002±0.00 0.922±0.33 N/A N/A N/A N/A 0.003±0.00 N/A N/A N/A N/A 0.020±0.00

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