C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005HI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000076937-ENSDARG00000063447 CGP 7955 Zv9_NA429:4133-25212
GeneTranscriptPositionBiotype
ENSDARG00000063447 (KLHL28)
kelch-like family member 28 		ENSDART00000092737 (KLHL28-201) 20023-25212 protein_coding
ENSDARG00000076937 (CZv9_NA429H14orf28)
chromosome 14 open reading frame 28 		ENSDART00000111290 (CZv9_NA429H14orf28-201) 4133-10573 protein_coding
CIL_0005HI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000179476-ENSG00000179454 CGP 9606 14:44897295-45042322
GeneTranscriptPositionBiotype
ENSG00000179476 (C14orf28)
chromosome 14 open reading frame 28 		ENST00000325192 (C14orf28-001) 44897295-44907257 protein_coding
ENST00000553841 (C14orf28-004) 44900756-44904529 processed_transcript
ENST00000555826 (C14orf28-002) 44900414-44907256 retained_intron
ENST00000557112 (C14orf28-003) 44897335-44905569 protein_coding
ENSG00000198718 (FAM179B)
family with sequence similarity 179, member B 		ENST00000361462 (FAM179B-002) 44962239-45074431 protein_coding
ENST00000361577 (FAM179B-001) 44962208-45074431 protein_coding
ENST00000555586 (FAM179B-006) 45025473-45027334 retained_intron
ENST00000555607 (FAM179B-004) 44962214-45008147 retained_intron
ENST00000555874 (FAM179B-007) 44995480-45004288 protein_coding
ENST00000555945 (FAM179B-005) 44962219-44997404 retained_intron
ENST00000556105 (FAM179B-009) 45011887-45028296 retained_intron
ENST00000556823 (FAM179B-010) 45068442-45073803 protein_coding
ENST00000557250 (FAM179B-008) 44995819-45006267 protein_coding
ENST00000557423 (FAM179B-003) 44962213-45074431 nonsense_mediated_decay
ENSG00000258949 (RP11-857B24.5)
 ENST00000555157 (RP11-857B24.5-001) 44898908-44911863 antisense

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0005HI_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000047227-ENSMUSG00000020948 CGP 10090 12:64917911-64965536
GeneTranscriptPositionBiotype
ENSMUSG00000020948 (Klhl28)
kelch-like 28 		ENSMUST00000021331 (Klhl28-201) 64942440-64965536 protein_coding
ENSMUSG00000047227 (Gm527)
predicted gene 527 		ENSMUST00000058135 (Gm527-201) 64917911-64924591 protein_coding

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005HI_0001ENSDARG00000063447ENSDART00000092737ENSDARG00000076937ENSDART00000111290CIL_0005HI_0002ENSG00000179476ENST00000325192ENST00000553841ENST00000555826ENST00000557112ENSG00000198718ENST00000361462ENST00000361577ENST00000555586ENST00000555607ENST00000555874ENST00000555945ENST00000556105ENST00000556823ENST00000557250ENST00000557423ENSG00000258949ENST00000555157CIL_0005HI_0003ENSMUSG00000020948ENSMUST00000021331ENSMUSG00000047227ENSMUST00000058135
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005HI_0001ENSDARG00000063447ENSDART00000092737ENSDARG00000076937ENSDART00000111290CIL_0005HI_0002ENSG00000179476ENST00000325192ENST00000553841ENST00000555826ENST00000557112ENSG00000198718ENST00000361462ENST00000361577ENST00000555607ENST00000555945ENST00000557423ENSG00000258949ENST00000555157CIL_0005HI_0003ENSMUSG00000020948ENSMUST00000021331ENSMUSG00000047227ENSMUST00000058135
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000063447 ENSDART00000092737 N/A N/A N/A N/A N/A N/A N/A 0.723±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000076937 ENSDART00000111290 N/A N/A N/A N/A N/A N/A 2.135±0.00 N/A 0.134±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000179476 ENST00000325192 0.692±0.00 0.423±0.00 N/A 0.876±0.51 0.683±0.14 0.855±0.18 0.640±0.00 0.830±0.18 1.025±0.58 0.185±0.00 0.400±0.00 0.834±0.63 0.554±0.07 1.786±0.62
ENST00000553841 1.250±0.00 N/A N/A N/A N/A 1.533±0.00 N/A 1.031±0.00 1.253±0.00 N/A 2.929±0.00 N/A N/A N/A
ENST00000555826 N/A 0.165±0.00 N/A 0.124±0.00 N/A 0.175±0.00 N/A 0.093±0.00 N/A 0.216±0.00 N/A 0.415±0.00 N/A N/A
ENST00000557112 0.860±0.00 0.863±0.00 0.353±0.00 0.447±0.00 2.355±0.00 2.071±0.00 1.054±0.46 0.753±0.41 1.488±0.00 1.193±0.00 0.998±0.01 0.424±0.00 0.889±0.13 4.859±0.35
ENSG00000198718 ENST00000361462 0.606±0.00 0.786±0.00 N/A 5.118±2.64 1.564±0.88 1.018±0.00 1.685±0.71 1.704±0.33 0.401±0.00 1.671±0.85 1.204±0.00 3.800±1.03 0.616±0.11 2.167±0.00
ENST00000361577 N/A N/A 0.867±0.00 N/A N/A 2.288±0.00 1.602±0.00 N/A 3.928±0.00 N/A 1.078±0.00 N/A N/A N/A
ENST00000555586 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555607 N/A N/A 1.347±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555874 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555945 N/A N/A 0.946±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556105 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556823 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557250 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557423 0.512±0.00 1.090±0.00 1.018±0.00 N/A 0.874±0.32 N/A N/A N/A N/A 0.662±0.00 N/A 1.235±0.41 0.925±0.00 2.194±0.00
ENSG00000258949 ENST00000555157 0.276±0.00 N/A N/A N/A 0.260±0.13 0.073±0.00 1.064±0.00 0.112±0.00 0.974±0.00 1.252±0.83 N/A 0.359±0.00 0.135±0.03 3.718±0.39
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020948 ENSMUST00000021331 0.480±0.00 2.256±0.45 N/A 2.487±0.00 1.384±0.67 1.152±0.38 0.439±0.11 0.710±0.38 1.159±0.27 2.664±0.12 0.724±0.00 2.213±0.65 1.168±0.35 3.849±1.81
ENSMUSG00000047227 ENSMUST00000058135 0.880±0.27 0.317±0.22 0.823±0.16 1.975±0.71 0.405±0.24 1.746±0.93 0.589±0.13 0.322±0.10 0.182±0.09 0.429±0.18 0.585±0.17 1.101±0.53 1.034±0.40 13.308±1.90

Loading