C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005JU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000159720-ENSG00000159723 CGP 9606 16:67438014-67483813
GeneTranscriptPositionBiotype
ENSG00000159720 (ATP6V0D1)
ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1 		ENST00000290949 (ATP6V0D1-001) 67438019-67481237 protein_coding
ENST00000426604 (ATP6V0D1-004) 67438413-67459225 nonsense_mediated_decay
ENST00000540149 (ATP6V0D1-002) 67438476-67481117 protein_coding
ENST00000561658 (ATP6V0D1-013) 67452244-67481157 processed_transcript
ENST00000561852 (ATP6V0D1-014) 67438809-67481148 nonsense_mediated_decay
ENST00000563064 (ATP6V0D1-007) 67438822-67481181 nonsense_mediated_decay
ENST00000563305 (ATP6V0D1-006) 67438037-67439818 retained_intron
ENST00000564191 (ATP6V0D1-008) 67439088-67481086 nonsense_mediated_decay
ENST00000564615 (ATP6V0D1-017) 67438825-67453715 protein_coding
ENST00000564788 (ATP6V0D1-016) 67439108-67481168 nonsense_mediated_decay
ENST00000565835 (ATP6V0D1-015) 67438321-67481079 protein_coding
ENST00000566322 (ATP6V0D1-009) 67439053-67459180 nonsense_mediated_decay
ENST00000567170 (ATP6V0D1-011) 67438845-67443407 retained_intron
ENST00000567694 (ATP6V0D1-012) 67438541-67441392 processed_transcript
ENST00000568101 (ATP6V0D1-010) 67443100-67459219 nonsense_mediated_decay
ENST00000568298 (ATP6V0D1-003) 67454579-67481157 retained_intron
ENST00000568620 (ATP6V0D1-005) 67438014-67441732 retained_intron
ENST00000602876 (ATP6V0D1-201) 67438019-67481110 protein_coding
ENSG00000159723 (AGRP)
agouti related neuropeptide 		ENST00000290953 (AGRP-001) 67482571-67483813 protein_coding
ENSG00000270049 (RP11-297D21.4)
 ENST00000602476 (RP11-297D21.4-002) 67484242-67487250 antisense
ENST00000602592 (RP11-297D21.4-003) 67481314-67481956 antisense
ENST00000602596 (RP11-297D21.4-001) 67481384-67484669 antisense
CIL_0005JU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000013160-ENSMUSG00000005705 CGP 10090 8:105524465-105568298
GeneTranscriptPositionBiotype
ENSMUSG00000005705 (Agrp)
agouti related protein 		ENSMUST00000005849 (Agrp-201) 105566700-105568298 protein_coding
ENSMUSG00000013160 (Atp6v0d1)
ATPase, H+ transporting, lysosomal V0 subunit D1 		ENSMUST00000013304 (Atp6v0d1-001) 105524465-105566047 protein_coding
ENSMUST00000144486 (Atp6v0d1-002) 105530651-105539476 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005JU_0001ENSG00000159720ENST00000290949ENST00000426604ENST00000540149ENST00000561658ENST00000561852ENST00000563064ENST00000563305ENST00000564191ENST00000564615ENST00000564788ENST00000565835ENST00000566322ENST00000567170ENST00000567694ENST00000568101ENST00000568298ENST00000568620ENST00000602876ENSG00000159723ENST00000290953ENSG00000270049ENST00000602476ENST00000602592ENST00000602596CIL_0005JU_0002ENSMUSG00000005705ENSMUST00000005849ENSMUSG00000013160ENSMUST00000013304ENSMUST00000144486
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005JU_0001ENSG00000159720ENST00000290949ENST00000561658ENST00000561852ENST00000564191ENST00000565835ENST00000567694ENST00000568298ENST00000602876ENSG00000159723ENST00000290953ENSG00000270049ENST00000602476ENST00000602592ENST00000602596CIL_0005JU_0002ENSMUSG00000005705ENSMUST00000005849ENSMUSG00000013160ENSMUST00000013304
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000159720 ENST00000290949 21.936±0.00 32.200±0.00 2.171±0.00 38.491±18.19 17.564±13.98 8.390±4.37 10.326±7.53 34.203±29.24 21.407±0.00 31.006±0.00 39.232±0.00 31.949±14.72 65.617±3.91 44.586±16.72
ENST00000426604 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540149 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561658 N/A N/A N/A N/A N/A 10.036±0.00 N/A N/A 3.900±0.00 N/A 16.268±0.00 N/A N/A N/A
ENST00000561852 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.694±0.00 N/A N/A N/A 26.742±0.00
ENST00000563064 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563305 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564191 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.822±0.00 N/A N/A N/A N/A
ENST00000564615 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564788 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565835 18.540±0.00 34.235±0.00 2.083±0.00 50.214±0.00 23.601±0.00 17.064±0.00 10.221±0.00 38.250±0.00 23.045±0.00 17.868±0.00 19.427±0.00 18.308±2.80 20.353±2.07 25.686±0.47
ENST00000566322 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567170 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567694 N/A N/A 3.482±0.00 N/A N/A 6.771±0.00 N/A N/A N/A 3.747±0.00 N/A 36.581±0.00 79.558±0.00 72.298±0.00
ENST00000568101 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568298 N/A N/A 0.534±0.00 N/A 0.638±0.00 0.705±0.00 N/A N/A 0.425±0.00 0.415±0.00 N/A N/A N/A N/A
ENST00000568620 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602876 8.322±0.00 N/A N/A 5.617±0.00 N/A 9.506±0.00 4.053±0.00 1.034±0.00 1.842±0.00 8.707±6.26 6.374±0.00 3.013±0.00 18.676±2.55 N/A
ENSG00000159723 ENST00000290953 0.169±0.00 0.143±0.00 N/A 0.123±0.08 N/A 0.303±0.00 0.069±0.00 0.694±0.00 N/A N/A N/A 0.180±0.16 0.150±0.07 1.610±1.05
ENSG00000270049 ENST00000602476 N/A 0.248±0.00 N/A N/A 0.401±0.30 N/A N/A N/A N/A 0.286±0.00 N/A 0.490±0.24 0.223±0.00 1.269±0.00
ENST00000602592 N/A N/A N/A 0.090±0.00 0.250±0.00 N/A 0.062±0.00 0.402±0.00 N/A 0.317±0.00 N/A N/A N/A 0.287±0.11
ENST00000602596 0.236±0.00 1.117±0.00 0.407±0.00 0.133±0.00 0.820±0.49 0.428±0.27 0.210±0.06 0.267±0.00 0.180±0.04 0.561±0.51 1.286±0.00 0.683±0.44 0.411±0.04 0.764±0.29
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000005705 ENSMUST00000005849 0.102±0.04 1.822±0.78 0.123±0.00 0.468±0.01 0.493±0.19 0.251±0.08 0.181±0.00 N/A 0.081±0.02 0.950±0.30 0.139±0.06 1.302±0.43 3.156±1.61 0.437±0.00
ENSMUSG00000013160 ENSMUST00000013304 82.569±20.38 49.012±1.69 64.079±4.79 96.026±18.89 61.435±14.23 57.286±3.27 23.710±3.12 73.546±8.44 36.299±4.25 56.053±1.89 14.848±1.62 49.984±5.61 72.222±9.53 15.978±4.98
ENSMUST00000144486 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Loading