C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, H+ transporting, lysosomal V0 subunit D1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000013304 Atp6v0d1-001 ENSMUSG00000013160 10090 - 8:105524465-105566047 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000013304
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000013304 82.569±20.38 49.012±1.69 64.079±4.79 96.026±18.89 61.435±14.23 57.286±3.27 23.710±3.12 73.546±8.44 36.299±4.25 56.053±1.89 14.848±1.62 49.984±5.61 72.222±9.53 15.978±4.98

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005JT CIL_0005JT_0002 CGP 8:105518746-105566047
CIL_0005JU CIL_0005JU_0002 CGP 8:105524465-105568298

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005765 IEA lysosomal membrane
GO:0005769 IDA early endosome
GO:0005813 ISS centrosome
GO:0007420 IEA brain development
GO:0008021 IEA synaptic vesicle
GO:0008553 IDA hydrogen-exporting ATPase activity, phosphorylative mechanism
GO:0015991 IEA ATP hydrolysis coupled proton transport
GO:0016020 IEA membrane
GO:0016324 IEA apical plasma membrane
GO:0032403 IEA protein complex binding
GO:0033179 IEA proton-transporting V-type ATPase, V0 domain
GO:0042384 ISS cilium assembly
GO:0043005 IEA neuron projection
GO:0043234 IEA protein complex
GO:0043679 IEA axon terminus
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000290949 ATP6V0D1-001 protein_coding Homo_sapiens 0 1413
ENST00000426604 ATP6V0D1-004 nonsense_mediated_decay Homo_sapiens 0 1197
ENST00000540149 ATP6V0D1-002 protein_coding Homo_sapiens 0 983
ENST00000561658 ATP6V0D1-013 processed_transcript Homo_sapiens 0 442
ENST00000561852 ATP6V0D1-014 nonsense_mediated_decay Homo_sapiens 0 749
ENST00000563064 ATP6V0D1-007 nonsense_mediated_decay Homo_sapiens 0 950
ENST00000564191 ATP6V0D1-008 nonsense_mediated_decay Homo_sapiens 0 512
ENST00000564615 ATP6V0D1-017 protein_coding Homo_sapiens 0 630
ENST00000564788 ATP6V0D1-016 nonsense_mediated_decay Homo_sapiens 0 436
ENST00000565835 ATP6V0D1-015 protein_coding Homo_sapiens 0 189
ENST00000566322 ATP6V0D1-009 nonsense_mediated_decay Homo_sapiens 0 780
ENST00000568101 ATP6V0D1-010 nonsense_mediated_decay Homo_sapiens 0 547
ENST00000568298 ATP6V0D1-003 retained_intron Homo_sapiens 0 219
ENST00000602876 ATP6V0D1-201 protein_coding Homo_sapiens 0 1474

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