C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0005KJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000023396-ENSDARG00000002445 CGP 7955 16:8599863-8662788
GeneTranscriptPositionBiotype
ENSDARG00000002445 (prdm1a)
PR domain containing 1a, with ZNF domain
ENSDART00000017445 (prdm1a-001) 8650398-8662788 protein_coding
ENSDARG00000023396 (atg5)
ATG5 autophagy related 5 homolog (S. cerevisiae)
ENSDART00000029727 (atg5-002) 8599863-8635932 protein_coding
ENSDART00000149086 (atg5-001) 8599899-8635921 protein_coding
CIL_0005KJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038160-ENSMUSG00000038151 CGP 10090 10:44268358-44528501
GeneTranscriptPositionBiotype
ENSMUSG00000038151 (Prdm1)
PR domain containing 1, with ZNF domain
ENSMUST00000039174 (Prdm1-001) 44437177-44458748 protein_coding
ENSMUST00000105490 (Prdm1-002) 44438293-44458687 protein_coding
ENSMUST00000167340 (Prdm1-003) 44446717-44528501 processed_transcript
ENSMUSG00000038160 (Atg5)
autophagy related 5
ENSMUST00000039286 (Atg5-201) 44268358-44364291 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005KJ_0001ENSDARG00000002445ENSDART00000017445ENSDARG00000023396ENSDART00000029727ENSDART00000149086CIL_0005KJ_0002ENSMUSG00000038151ENSMUST00000039174ENSMUST00000105490ENSMUST00000167340ENSMUSG00000038160ENSMUST00000039286
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005KJ_0001ENSDARG00000002445ENSDART00000017445ENSDARG00000023396ENSDART00000029727ENSDART00000149086CIL_0005KJ_0002ENSMUSG00000038151ENSMUST00000039174ENSMUST00000105490ENSMUST00000167340ENSMUSG00000038160ENSMUST00000039286
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000002445 ENSDART00000017445 N/A N/A N/A 0.122±0.02 N/A N/A 0.278±0.15 0.290±0.23 0.021±0.00 N/A 0.066±0.00 N/A N/A N/A
ENSDARG00000023396 ENSDART00000029727 N/A N/A N/A 4.582±3.67 N/A N/A 4.176±3.86 2.569±3.48 0.887±0.00 N/A N/A N/A N/A N/A
ENSDART00000149086 N/A N/A N/A 2.312±0.96 N/A N/A 0.932±0.00 3.094±0.00 0.627±0.00 N/A 2.626±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038151 ENSMUST00000039174 N/A 0.364±0.00 N/A N/A 0.221±0.00 0.587±0.00 N/A N/A 0.029±0.01 0.605±0.11 0.134±0.00 0.181±0.04 0.724±0.18 0.019±0.01
ENSMUST00000105490 N/A 0.529±0.00 N/A N/A 0.718±0.56 0.542±0.14 N/A 0.129±0.02 0.048±0.02 N/A N/A 0.747±0.35 1.246±0.22 0.034±0.02
ENSMUST00000167340 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.955±0.00 N/A
ENSMUSG00000038160 ENSMUST00000039286 8.157±1.26 12.083±1.27 11.724±1.34 6.665±2.16 7.253±0.44 8.985±0.99 3.980±0.24 8.846±0.37 11.068±3.40 7.528±0.47 3.879±0.69 8.076±1.54 10.635±2.84 1.348±0.60

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