C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0005LZ_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000088053-ENSG00000160439 | CGP | 9606 | 19:55013705-55071291  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000160439  (RDH13)retinol dehydrogenase 13 (all-trans/9-cis) |
ENST00000291892 (RDH13-002)
|
55044343-55063833 | nonsense_mediated_decay | |
|
ENST00000396247 (RDH13-001)
|
55044343-55069529 | protein_coding | ||
|
ENST00000415061 (RDH13-003)
|
55044343-55063176 | protein_coding | ||
|
ENST00000586331 (RDH13-021)
|
55039111-55041889 | processed_transcript | ||
|
ENST00000586945 (RDH13-010)
|
55056653-55069529 | protein_coding | ||
|
ENST00000587026 (RDH13-007)
|
55059253-55069540 | protein_coding | ||
|
ENST00000587046 (RDH13-018)
|
55064040-55069892 | processed_transcript | ||
|
ENST00000587373 (RDH13-009)
|
55063901-55069531 | processed_transcript | ||
|
ENST00000587721 (RDH13-015)
|
55047413-55063148 | nonsense_mediated_decay | ||
|
ENST00000588306 (RDH13-008)
|
55063220-55069540 | processed_transcript | ||
|
ENST00000588941 (RDH13-012)
|
55067195-55069502 | processed_transcript | ||
|
ENST00000589197 (RDH13-019)
|
55063508-55069523 | processed_transcript | ||
|
ENST00000589305 (RDH13-016)
|
55050874-55063119 | processed_transcript | ||
|
ENST00000589605 (RDH13-017)
|
55048657-55059174 | processed_transcript | ||
|
ENST00000590349 (RDH13-013)
|
55063752-55069491 | processed_transcript | ||
|
ENST00000591023 (RDH13-011)
|
55063271-55069520 | processed_transcript | ||
|
ENST00000591603 (RDH13-014)
|
55063041-55064368 | processed_transcript | ||
|
ENST00000591868 (RDH13-022)
|
55042039-55044949 | processed_transcript | ||
|
ENST00000591960 (RDH13-005)
|
55039111-55063076 | nonsense_mediated_decay | ||
|
ENST00000592423 (RDH13-020)
|
55039108-55043107 | processed_transcript | ||
|
ENST00000592573 (RDH13-004)
|
55044855-55063086 | nonsense_mediated_decay | ||
|
ENST00000593134 (RDH13-006)
|
55063948-55071291 | processed_transcript | ||
|
ENST00000610356 (RDH13-201)
|
55044324-55063217 | protein_coding | ||
| CIL_0005LZ_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000078810-ENSMUSG00000008435 | CGP | 10090 | 7:4368713-4445649 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000008435 (Rdh13) retinol dehydrogenase 13 (all-trans and 9-cis) |
ENSMUST00000008579 (Rdh13-001)
|
4425667-4445649 | protein_coding | |
|
ENSMUST00000119485 (Rdh13-002)
|
4424770-4445601 | protein_coding | ||
|
ENSMUST00000128299 (Rdh13-004)
|
4443737-4445642 | processed_transcript | ||
|
ENSMUST00000138798 (Rdh13-006)
|
4435033-4445181 | protein_coding | ||
|
ENSMUST00000147599 (Rdh13-003)
|
4440407-4445593 | retained_intron | ||
|
ENSMUST00000154033 (Rdh13-005)
|
4444202-4445626 | processed_transcript | ||
|
ENSMUSG00000078810 (Gp6) glycoprotein 6 (platelet) |
ENSMUST00000108590 (Gp6-201)
|
4368713-4397744 | protein_coding | |
|
ENSMUSG00000095246 (Gm24752) predicted gene, 24752 |
ENSMUST00000178240 (Gm24752-201)
|
4393011-4393120 | miRNA | |
|
ENSMUSG00000096075 (Gm25349) predicted gene, 25349 |
ENSMUST00000177728 (Gm25349-201)
|
4388452-4388561 | miRNA | |
Expression Patterns
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